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Based on a newly developed contact-density chain-growth algorithm, we have simulated a nongrafted peptide in the vicinity of different attractive substrates. We analyzed the specificity of the peptide adsorption by focussing on the…

Soft Condensed Matter · Physics 2007-10-24 Michael Bachmann , Wolfhard Janke

We study a 12-parameter stochastic process involving particles with two-site interaction and hard-core repulsion on a $d$-dimensional lattice. In this model, which includes the asymmetric exclusion process, contact processes and other…

Condensed Matter · Physics 2009-10-22 Gunter M. Schütz

The surprising recent discoveries of quasicrystals and their approximants in soft matter systems poses the intriguing possibility that these structures can be realized in a broad range of nano- and micro-scale assemblies. It has been…

Soft Condensed Matter · Physics 2012-01-10 Christopher R. Iacovella , Aaron S. Keys , Sharon C. Glotzer

In this paper, we present a 2D numerical model developed to simulate the dynamics of soft, deformable particles. To accommodate significant particle deformations, the particle surface is represented as a narrow shell composed of mass points…

Computational Physics · Physics 2025-04-01 Yohann Trivino , Vincent Richefeu , Farhang Radjai , Komlanvi Lampoh , Jean-Yves Delenne

We study the dynamics of an exactly solvable lattice model for inhomogeneous interface growth. The interface grows deterministically with constant velocity except along a defect line where the growth process is random. We obtain exact…

Condensed Matter · Physics 2009-10-28 Gunter M. Schütz

A discrete model for the sintering of polydisperse, inhomogeneous arrays of cylinders is presented with empirical contact force-laws, taking into account plastic deformations, cohesion, temperature dependence (melting), and long-time…

Statistical Mechanics · Physics 2007-05-23 Stefan Luding , Karsten Manetsberger , Johannes Müllers

The surface curvature of membranes, interfaces, and substrates plays a crucial role in shaping the self-assembly of particles adsorbed on these surfaces. However, little is known about the interplay between particle anisotropy and surface…

Soft Condensed Matter · Physics 2025-10-30 Gautam Bordia , Thomas P. Russell , Ahmad K. Omar

We perform numerical simulations of purely repulsive soft colloidal particles interacting via a generalized elastic potential and constrained to a two-dimensional plane and to the surface of a spherical shell. For the planar case, we…

Soft Condensed Matter · Physics 2011-06-16 William L. Miller , Angelo Cacciuto

We develop a bonded-particle model for magneto-elastic rods that unifies large deformations, contact, and long-range magnetic interactions within a single discrete-element framework. The rod is discretized into orientable particles…

Soft Condensed Matter · Physics 2026-03-31 Gabriel Alkuino , Joel T. Clemmer , Christian D. Santangelo , Teng Zhang

We have developed a simulation model to describe particle adsorption to and desorption from liquid interfaces. Using this model we formulate a closed interfacial equation of state for repulsive elastic spheres. The effect of a long-range…

Soft Condensed Matter · Physics 2011-02-24 Robert D. Groot , Simeon D. Stoyanov

Effective pair interactions with a soft-repulsive component are a well-known feature of polymer solutions and colloidal suspensions, but they also provide a key to interpret the high-pressure behaviour of simple elements. We have computed…

Soft Condensed Matter · Physics 2009-09-08 Santi Prestipino , Franz Saija , Gianpietro Malescio

Colloidal particles, amphiphiles, and functionalized nanoparticles are examples of systems that frequently exhibit short-range attractions coupled with long-range repulsions. In this work, we observe striking differences in the dynamics of…

Soft Condensed Matter · Physics 2017-06-01 Jakub Pȩkalski , Andrew P. Santos , Athanassios Z. Panagiotopoulos

Applying the contact density chain-growth algorithm to lattice heteropolymers, we identify the conformational transitions of a nongrafted hydrophobic-polar heteropolymer with 103 residues in the vicinity of a polar, a hydrophobic, and a…

Soft Condensed Matter · Physics 2009-11-13 Michael Bachmann , Wolfhard Janke

We study the model of a partially directed flexible or semi-flexible homopolymer on a square lattice, subject to an externally applied force, in a direction either parallel to, or perpendicular to the preferred direction. The polymer is…

Statistical Mechanics · Physics 2015-05-19 Pui-Man Lam , Yi Zhen

We analyze the formation and dynamics of bright unstaggered solitons in the disk-shaped dipolar Bose-Einstein condensate, which features the interplay of contact (collisional) and long-range dipole-dipole (DD) interactions between atoms.…

Pattern Formation and Solitons · Physics 2015-05-14 Goran Gligorić , Aleksandra Maluckov , Milutin Stepić , Ljupčo Hadžievski , Boris A. Malomed

When captured by a flat nematic-isotropic interface, colloidal particles can be dragged by it. As a result spatially periodic structures may appear, with the period depending on a particle mass, size, and interface…

Soft Condensed Matter · Physics 2009-11-11 J. L. West , K. Zhang , A. Glushchenko , D. Andrienko , M. Tasinkevych , Y. Reznikov

We introduce and study a simple and natural class of solvable stochastic lattice gases. This is the class of \emph{Strong Particles}. The name is due to the fact that when they try to jump to an occupied site they succeed pushing away a…

Statistical Mechanics · Physics 2018-05-03 Davide Gabrielli , P. L. Krapivsky

The rapid progress in precisely designing the surface decoration of patchy colloidal particles offers a new, yet unexperienced freedom to create building entities for larger, more complex structures in soft matter systems. However, it is…

Soft Condensed Matter · Physics 2012-06-14 G. Doppelbauer , E. G. Noya , E. Bianchi , G. Kahl

The finite volume correction for a mean-field monomer-dimer system with an attractive interaction are computed for the pressure density, the monomer density and the susceptibility. The results are obtained by introducing a two-dimensional…

Mathematical Physics · Physics 2019-02-20 Diego Alberici , Pierluigi Contucci , Rachele Luzi , Cecilia Vernia

We numerically study a simple fluid composed of particles having a hard-core repulsion, complemented by two short-ranged attractive (sticky) spots at the particle poles, which provides a simple model for equilibrium polymerization of linear…

Soft Condensed Matter · Physics 2009-11-13 F. Sciortino , E. Bianchi , J. F. Douglas , P. Tartaglia