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Ensemble averages of a stochastic model show that, after a formation stage, the tips of active blood vessels in an angiogenic network form a moving two dimensional stable diffusive soliton, which advances toward sources of growth factor.…

Statistical Mechanics · Physics 2020-08-26 L. L. Bonilla , M. Carretero , F. Terragni

A recent conceptual model of tumor-driven angiogenesis including branching, elongation, and anastomosis of blood vessels captures some of the intrinsic multiscale structures of this complex system, yet allowing to extract a deterministic…

Tissues and Organs · Quantitative Biology 2016-02-24 F. Terragni , M. Carretero , V. Capasso , L. L. Bonilla

Complex biological processes involve collective behavior of entities (bacteria, cells, animals) over many length and time scales and can be described by discrete models that track individuals or by continuum models involving densities and…

Soft Condensed Matter · Physics 2023-11-16 F. Terragni , W. D. Martinson , M. Carretero , P. K. Maini , L. L. Bonilla

When modeling of tumor-driven angiogenesis, a major source of analytical and computational complexity is the strong coupling between the kinetic parameters of the relevant stochastic branching-and-growth of the capillary network, and the…

Tissues and Organs · Quantitative Biology 2014-12-24 L. L. Bonilla , V. Capasso , M. Alvaro , M. Carretero

In the field of Life Sciences it it very common to deal with extremely complex systems, from both analytical and computational points of view, due to the unavoidable coupling of different interacting structures. As an example, angiogenesis…

Probability · Mathematics 2017-08-15 Vincenzo Capasso , Franco Flandoli

Angiogenesis is the formation of new blood vessels from pre-existing ones in response to chemical signals secreted by, for example, a wound or a tumour. In this paper, we propose a mesoscopic lattice-based model of angiogenesis, in which…

Tissues and Organs · Quantitative Biology 2016-03-02 Fabian Spill , Pilar Guerrero , Tomas Alarcon , Philip K. Maini , Helen M. Byrne

Hypoxy induced angiogenesis processes can be described coupling an integrodifferential kinetic equation of Fokker-Planck type with a diffusion equation for the angiogenic factor. We propose high order positivity preserving schemes to…

Numerical Analysis · Mathematics 2021-03-22 A. Carpio , E. Cebrian

We develop an agent-based model of vasculogenesis, the de novo formation of blood vessels. Endothelial cells in the vessel network are viewed as linearly elastic spheres and are of two types: vessel elements are contained within the…

Quantitative Methods · Quantitative Biology 2016-10-04 Holger Perfahl , Barry D Hughes , Tomas Alaracon , Philip K Maini , Mark C Lloyd , Matthias Reuss , Helen M Byrne

Angiogenesis is a multiscale process by which a primary blood vessel issues secondary vessel sprouts that reach regions lacking oxygen. Angiogenesis can be a natural process of organ growth and development or a pathological induced by a…

Analysis of PDEs · Mathematics 2022-10-28 Björn Birnir , Luis Bonilla , Manuel Carretero , Filippo Terragni

We study a system of particles in a two-dimensional geometry that move according to a reinforced random walk with transition probabilities dependent on the solutions of reaction-diffusion equations for the underlying fields. A birth process…

Tissues and Organs · Quantitative Biology 2021-04-02 L. L. Bonilla , M. Carretero , F. Terragni

The cooperative dynamics of a 1-D collection of Markov jump, interacting stochastic processes is studied via a mean-field approach. In the time-asymptotic regime, the resulting nonlinear master equation is analytically solved. The…

Probability · Mathematics 2015-01-29 Max-Olivier Hongler

A coupled system of nonlinear mixed-type equations modeling early stages of angiogenesis is analyzed in a bounded domain. The system consists of stochastic differential equations describing the movement of the positions of the tip and stalk…

Analysis of PDEs · Mathematics 2022-06-24 Markus Fellner , Ansgar Jüngel

Hot spots in tumors are regions of high vascular density in the center of the tumor and their analysis is an important diagnostic tool in cancer treatment. We present a model for vascular remodeling in tumors predicting that the formation…

Tissues and Organs · Quantitative Biology 2008-01-07 Michael Welter , Katalin Bartha , Heiko Rieger

Unidirectional motion of solitons can take place, although the applied force has zero average in time, when the spatial symmetry is broken by introducing a potential $V(x)$, which consists of periodically repeated cells with each cell…

Mesoscale and Nanoscale Physics · Physics 2016-08-31 F. G. Mertens , L. Morales-Molina , A. R. Bishop , A. Sánchez , P. Müller

We discuss the characteristics of the patterns of the vascular networks in a mathematical model for angiogenesis. Based on recent in vitro experiments, this mathematical model assumes that the elongation and bifurcation of blood vessels…

Pattern Formation and Solitons · Physics 2021-06-15 Jun Mada , Tetsuji Tokihiro

In this work, we present a coupled 3D-1D model of solid tumor growth within a dynamically changing vascular network to facilitate realistic simulations of angiogenesis. Additionally, the model includes erosion of the extracellular matrix,…

Tissues and Organs · Quantitative Biology 2021-06-23 Marvin Fritz , Prashant K. Jha , Tobias Köppl , J. Tinsley Oden , Andreas Wagner , Barbara Wohlmuth

Employing a novel two-dimensional computational model we have simulated the feedback between angiogenesis and tumor growth dynamics. Analyzing vessel formation and elongation towards the concentration gradient of the tumor-derived…

Tissues and Organs · Quantitative Biology 2007-05-23 Eun Bo Shim , Yoo Seok Kim , Thomas S. Deisboeck

The transformation of the regular vasculature in normal tissue into a highly inhomogeneous tumor specific capillary network is described by a theoretical model incorporating tumor growth, vessel cooption, neo-vascularization, vessel…

Tissues and Organs · Quantitative Biology 2016-09-08 K. Bartha , H. Rieger

Coupled solitary waves in optics literature, are coined vector solitons to reflect their particle-like nature that remains intact even after mutual collisions. They are born from a nonlinear change in the refractive index of an optical…

Optics · Physics 2022-06-23 Finn Buldt , Pascal Basséne , Moussa N'Gom

Being ubiquitous, solitons have particle-like properties, exhibiting behaviour often associated with atoms. Bound solitons emulate dynamics of molecules, though solitonic analogues of polymeric materials have not been considered yet. Here…

Pattern Formation and Solitons · Physics 2023-08-16 Hanqing Zhao , Boris A. Malomed , Ivan I. Smalyukh
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