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A mixture of multivariate Poisson-log normal factor analyzers is introduced by imposing constraints on the covariance matrix, which resulted in flexible models for clustering purposes. In particular, a class of eight parsimonious mixture…

Methodology · Statistics 2023-11-15 Andrea Payne , Anjali Silva , Steven J. Rothstein , Paul D. McNicholas , Sanjeena Subedi

Randomized response (RR) designs are used to collect response data about sensitive behaviors (e.g., criminal behavior, sexual desires). The modeling of RR data is more complex, since it requires a description of the RR process. For the…

Methodology · Statistics 2021-06-21 Jean-Paul Fox , Konrad Klotzke , Duco Veen

Customizing LLMs for a specific task involves separating high-quality responses from lower-quality ones. This skill can be developed using supervised fine-tuning with extensive human preference data. However, obtaining a large volume of…

Computation and Language · Computer Science 2024-07-24 Yikun Wang , Rui Zheng , Haoming Li , Qi Zhang , Tao Gui , Fei Liu

This paper presents maplet, an open-source R package for the creation of highly customizable, fully reproducible statistical pipelines for omics data analysis, with a special focus on metabolomics-based methods. It builds on the…

Existing approaches typically rely on large-scale fine-tuning to adapt LLMs for information reranking tasks, which is computationally expensive. In this work, we demonstrate that modern LLMs can be effectively adapted using only minimal,…

Computation and Language · Computer Science 2025-10-28 Tingyu Song , Yilun Zhao , Siyue Zhang , Chen Zhao , Arman Cohan

We introduce a software package, denoted as ORKM, that incorporates the Online Regu larized K-Means Clustering (ORKMC) algorithm for processing online multi/single-view data. The function ORKMeans of the ORKMC utilizes a regularization term…

Applications · Statistics 2025-04-23 Miao Yu , Guangbao Guo

BayesMallows is an R package for analyzing data in the form of rankings or preferences with the Mallows rank model, and its finite mixture extension, in a Bayesian probabilistic framework. The Mallows model is a well-known model, grounded…

Computation · Statistics 2020-10-13 Øystein Sørensen , Marta Crispino , Qinghua Liu , Valeria Vitelli

Summary: MALDIquant is an R package providing a complete and modular analysis pipeline for quantitative analysis of mass spectrometry data. MALDIquant is specifically designed with application in clinical diagnostics in mind and implements…

Genomics · Quantitative Biology 2012-08-30 Sebastian Gibb , Korbinian Strimmer

Missingness in categorical data is a common problem in various real applications. Traditional approaches either utilize only the complete observations or impute the missing data by some ad hoc methods rather than the true conditional…

Methodology · Statistics 2019-07-12 Chaojie Wang , Linghao Shen , Han Li , Xiaodan Fan

Probabilistic language models are widely used in Information Retrieval (IR) to rank documents by the probability that they generate the query. However, the implementation of the probabilistic representations with programming languages that…

Information Retrieval · Computer Science 2016-10-05 Yanshan Wang , Hongfang Liu

Probabilistic finite mixture models are widely used for unsupervised clustering. These models can often be improved by adapting them to the topology of the data. For instance, in order to classify spatially adjacent data points similarly,…

Computer Vision and Pattern Recognition · Computer Science 2022-02-09 Jonathan Vacher , Claire Launay , Ruben Coen-Cagli

This paper studies the problem of inferring a global preference based on the partial rankings provided by many users over different subsets of items according to the Plackett-Luce model. A question of particular interest is how to optimally…

Machine Learning · Statistics 2014-06-24 Bruce Hajek , Sewoong Oh , Jiaming Xu

Skewness plays a relevant role in several multivariate statistical techniques. Sometimes it is used to recover data features, as in cluster analysis. In other circumstances, skewness impairs the performances of statistical methods, as in…

Computation · Statistics 2019-03-26 Cinzia Franceschini , Nicola Loperfido

There is an increasingly rich literature about Bayesian nonparametric models for clustering functional observations. However, most of the recent proposals rely on infinite-dimensional characterizations that might lead to overly complex…

Methodology · Statistics 2019-07-05 Tommaso Rigon

This paper develops a clustering method that takes advantage of the sturdiness of model-based clustering, while attempting to mitigate some of its pitfalls. First, we note that standard model-based clustering likely leads to the same number…

Machine Learning · Statistics 2022-12-09 Miguel de Carvalho , Gabriel Martos Venturini , Andrej Svetlošák

Learning to Rank (LTR) methods generally assume that each document in a top-K ranking is presented in an equal format. However, previous work has shown that users' perceptions of relevance can be changed by varying presentations, i.e.,…

Information Retrieval · Computer Science 2025-07-01 Norman Knyazev , Harrie Oosterhuis

Clustering is widely used in unsupervised learning to find homogeneous groups of observations within a dataset. However, clustering mixed-type data remains a challenge, as few existing approaches are suited for this task. This study…

Machine Learning · Statistics 2025-11-26 Badih Ghattas , Alvaro Sanchez San-Benito

The aim of the plsRglm package is to deal with complete and incomplete datasets through several new techniques or, at least, some which were not yet implemented in R. Indeed, not only does it make available the extension of the PLS…

Computation · Statistics 2018-10-03 F. Bertrand , M. Maumy-Bertrand

Data augmentation plays a crucial role in enhancing the robustness and performance of machine learning models across various domains. In this study, we introduce a novel mixed-sample data augmentation method called RandoMix. RandoMix is…

Computer Vision and Pattern Recognition · Computer Science 2023-12-01 Xiaoliang Liu , Furao Shen , Jian Zhao , Changhai Nie

Clustering functional data is a challenging task due to intrinsic infinite-dimensionality and the need for stable, data-adaptive partitioning. In this work, we propose a clustering framework based on Random Projections, which simultaneously…

Methodology · Statistics 2025-12-18 Matteo Mori , Laura Anderlucci
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