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The {\em longest common subsequence (LCS)} problem is a classic and well-studied problem in computer science. Palindrome is a word which reads the same forward as it does backward. The {\em longest common palindromic subsequence (LCPS)}…

Data Structures and Algorithms · Computer Science 2011-10-25 Shihabur Rahman Chowdhury , Md. Mahbubul Hasan , Sumaiya Iqbal , M. Sohel Rahman

The longest common subsequence (LCS) problem is a central problem in stringology that finds the longest common subsequence of given two strings $A$ and $B$. More recently, a set of four constrained LCS problems (called generalized…

Data Structures and Algorithms · Computer Science 2020-01-17 Kohei Yamada , Yuto Nakashima , Shunsuke Inenaga , Hideo Bannai , Masayuki Takeda

Calculating the length of a longest common subsequence (LCS) of two strings $A$ and $B$ of length $n$ and $m$ is a classic research topic, with many worst-case oriented results known. We present two algorithms for LCS length calculation…

Data Structures and Algorithms · Computer Science 2014-05-22 Szymon Grabowski

The {\em longest common subsequence (LCS)} problem is a classic and well-studied problem in computer science. LCS is a central problem in stringology and finds broad applications in text compression, error-detecting codes and biological…

Data Structures and Algorithms · Computer Science 2010-04-20 Shihabur Rahman Chowdhury , Masud Hasan , Sumaiya Iqbal , M. Sohel Rahman

The Longest Common Substring (LCS) and Longest Palindromic Substring (LPS) are classical problems in computer science, representing fundamental challenges in string processing. Both problems can be solved in linear time using a classical…

Data Structures and Algorithms · Computer Science 2023-09-06 Domenico Cantone , Simone Faro , Arianna Pavone , Caterina Viola

We consider the longest common subsequence (LCS) problem with the restriction that the common subsequence is required to consist of at least $k$ length substrings. First, we show an $O(mn)$ time algorithm for the problem which gives a…

Data Structures and Algorithms · Computer Science 2017-02-07 Yohei Ueki , Diptarama , Masatoshi Kurihara , Yoshiaki Matsuoka , Kazuyuki Narisawa , Ryo Yoshinaka , Hideo Bannai , Shunsuke Inenaga , Ayumi Shinohara

In the classical longest palindromic substring (LPS) problem, we are given a string $S$ of length $n$, and the task is to output a longest palindromic substring in $S$. Gilbert, Hajiaghayi, Saleh, and Seddighin [SPAA 2023] showed how to…

Data Structures and Algorithms · Computer Science 2025-11-18 Solon P. Pissis

Palindromes are important objects in strings which have been extensively studied from combinatorial, algorithmic, and bioinformatics points of views. It is known that the length of the longest palindromic substrings (LPSs) of a given string…

Data Structures and Algorithms · Computer Science 2021-01-11 Mitsuru Funakoshi , Yuto Nakashima , Shunsuke Inenaga , Hideo Bannai , Masayuki Takeda

In this paper, we revisit the much studied LCS problem for two given sequences. Based on the algorithm of Iliopoulos and Rahman for solving the LCS problem, we have suggested 3 new improved algorithms. We first reformulate the problem in a…

Data Structures and Algorithms · Computer Science 2015-08-25 Daxin Zhu , Lei Wang , Yingjie Wu , Xiaodong Wang

The longest square subsequence (LSS) problem consists of computing a longest subsequence of a given string $S$ that is a square, i.e., a longest subsequence of form $XX$ appearing in $S$. It is known that an LSS of a string $S$ of length…

Data Structures and Algorithms · Computer Science 2020-07-30 Takafumi Inoue , Shunsuke Inenaga , Hideo Bannai

We present a practical algorithm for the cyclic longest common subsequence (CLCS) problem that runs in O(mn) time, where m and n are the lengths of the two input strings. While this is not necessarily an asymptotic improvement over the…

Data Structures and Algorithms · Computer Science 2012-08-17 Andy Nguyen

The Longest Common Subsequence (LCS) of two strings is a fundamental string similarity measure with a classical dynamic programming solution taking quadratic time. Despite significant efforts, little progress was made in improving the…

Data Structures and Algorithms · Computer Science 2021-12-17 Negev Shekel Nosatzki

Motivated by computing duplication patterns in sequences, a new fundamental problem called the longest subsequence-repeated subsequence (LSRS) is proposed. Given a sequence $S$ of length $n$, a letter-repeated subsequence is a subsequence…

Data Structures and Algorithms · Computer Science 2023-09-01 Manuel Lafond , Wenfeng Lai , Adiesha Liyanage , Binhai Zhu

In the longest common substring (LCS) problem, we are given two strings $S$ and $T$, each of length at most $n$, and we are asked to find a longest string occurring as a fragment of both $S$ and $T$. This is a classical and well-studied…

Data Structures and Algorithms · Computer Science 2018-07-17 Amihood Amir , Panagiotis Charalampopoulos , Solon P. Pissis , Jakub Radoszewski

The longest common subsequence (LCS) is a fundamental problem in string processing which has numerous algorithmic studies, extensions, and applications. A sequence $u_1, \ldots, u_f$ of $f$ strings s said to be an ($f$-)segmentation of a…

Data Structures and Algorithms · Computer Science 2025-02-27 Yuki Yonemoto , Takuya Mieno , Shunsuke Inenaga , Ryo Yoshinaka , Ayumi Shinohara

In this paper, we consider a generalized longest common subsequence problem with multiple substring inclusive constraints. For the two input sequences $X$ and $Y$ of lengths $n$ and $m$, and a set of $d$ constraints $P=\{P_1,\cdots,P_d\}$…

Data Structures and Algorithms · Computer Science 2015-05-26 Daxin Zhu , Lei Wang , Yingjie Wu , Xiaodong Wang

In this work, we consider a variant of the classical Longest Common Subsequence problem called Doubly-Constrained Longest Common Subsequence (DC-LCS). Given two strings s1 and s2 over an alphabet A, a set C_s of strings, and a function Co…

Data Structures and Algorithms · Computer Science 2013-11-20 Paola Bonizzoni , Gianluca Della Vedova , Riccardo Dondi , Yuri Pirola

In this paper we define a new problem, motivated by computational biology, $LCSk$ aiming at finding the maximal number of $k$ length $substrings$, matching in both input strings while preserving their order of appearance. The traditional…

Data Structures and Algorithms · Computer Science 2014-02-11 Gary Benson , Avivit Levy , Riva Shalom

We consider the classic problem of computing the Longest Common Subsequence (LCS) of two strings of length $n$. While a simple quadratic algorithm has been known for the problem for more than 40 years, no faster algorithm has been found…

Data Structures and Algorithms · Computer Science 2021-06-16 Karl Bringmann , Vincent Cohen-Addad , Debarati Das

Longest common substring (LCS), longest palindrome substring (LPS), and Ulam distance (UL) are three fundamental string problems that can be classically solved in near linear time. In this work, we present sublinear time quantum algorithms…

Quantum Physics · Physics 2023-12-29 François Le Gall , Saeed Seddighin
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