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This paper considers the problem of approximate nearest neighbor search in the compressed domain. We introduce polysemous codes, which offer both the distance estimation quality of product quantization and the efficient comparison of binary…

Computer Vision and Pattern Recognition · Computer Science 2018-06-07 Matthijs Douze , Hervé Jégou , Florent Perronnin

Mining large-scale high-throughput tandem mass spectrometry data sets is a very important problem in mass spectrometry based protein identification. One of the fundamental problems in large scale mining of spectra is to design appropriate…

Quantitative Methods · Quantitative Biology 2007-05-23 Debojyoti Dutta , Ting Chen

Locality-sensitive hashing converts high-dimensional feature vectors, such as image and speech, into bit arrays and allows high-speed similarity calculation with the Hamming distance. There is a hashing scheme that maps feature vectors to…

Machine Learning · Computer Science 2012-12-27 Makiko Konoshima , Yui Noma

Fast approximate nearest neighbor (NN) search in large databases is becoming popular. Several powerful learning-based formulations have been proposed recently. However, not much attention has been paid to a more fundamental question: how…

Machine Learning · Computer Science 2012-07-03 Junfeng He , Sanjiv Kumar , Shih-Fu Chang

Nearest Neighbor(s) search is the fundamental computational primitive to tackle massive dataset. Locality Sensitive Hashing (LSH) has been a bracing tool for Nearest Neighbor(s) search in high dimensional spaces. However, traditional LSH…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-05-24 Nan Zhu , Wenbo He , Xue Liu , Yu Hua

Distributed frameworks are gaining increasingly widespread use in applications that process large amounts of data. One important example application is large scale similarity search, for which Locality Sensitive Hashing (LSH) has emerged as…

Distributed, Parallel, and Cluster Computing · Computer Science 2012-10-29 Bahman Bahmani , Ashish Goel , Rajendra Shinde

Perfect hash functions can potentially be used to compress data in connection with a variety of data management tasks. Though there has been considerable work on how to construct good perfect hash functions, there is a gap between theory…

Data Structures and Algorithms · Computer Science 2007-05-23 Fabiano C. Botelho , Rasmus Pagh , Nivio Ziviani

When reasoning about tasks that involve large amounts of data, a common approach is to represent data items as objects in the Hamming space where operations can be done efficiently and effectively. Object similarity can then be computed by…

Information Retrieval · Computer Science 2021-03-29 Christian Hansen , Casper Hansen , Jakob Grue Simonsen , Christina Lioma

Analyzing high-dimensional data with manifold learning algorithms often requires searching for the nearest neighbors of all observations. This presents a computational bottleneck in statistical manifold learning when observations of…

Machine Learning · Computer Science 2022-03-11 Fan Cheng , Anastasios Panagiotelis , Rob J Hyndman

The Jaccard index is an important similarity measure for item sets and Boolean data. On large datasets, an exact similarity computation is often infeasible for all item pairs both due to time and space constraints, giving rise to faster…

Data Structures and Algorithms · Computer Science 2021-03-09 Marc Bury , Chris Schwiegelshohn , Mara Sorella

The multichannel rendezvous problem is a fundamental problem for neighbor discovery in many IoT applications. The existing works in the literature focus mostly on improving the worst-case performance, and the average-case performance is…

Networking and Internet Architecture · Computer Science 2022-11-14 Guann-Yng Jiang , Cheng-Shang Chang

Kernel methods have produced state-of-the-art results for a number of NLP tasks such as relation extraction, but suffer from poor scalability due to the high cost of computing kernel similarities between natural language structures. A…

Computation and Language · Computer Science 2019-05-22 Sahil Garg , Aram Galstyan , Greg Ver Steeg , Irina Rish , Guillermo Cecchi , Shuyang Gao

Recent years have witnessed extensive attention in binary code learning, a.k.a. hashing, for nearest neighbor search problems. It has been seen that high-dimensional data points can be quantized into binary codes to give an efficient…

Computer Vision and Pattern Recognition · Computer Science 2016-11-22 Hong Liu , Rongrong Ji , Yongjian Wu , Feiyue Huang

Pattern matching is a fundamental process in almost every scientific domain. The problem involves finding the positions of a given pattern (usually of short length) in a reference stream of data (usually of large length). The matching can…

Data Structures and Algorithms · Computer Science 2022-07-01 Anas Al-okaily , Abdelghani Tbakhi

Nearest neighbor search is a basic computational tool used extensively in almost research domains of computer science specially when dealing with large amount of data. However, the use of nearest neighbor search is restricted for the…

Social and Information Networks · Computer Science 2015-11-24 Suman Saha , S. P. Ghrera

Efficient indexing and searching of high dimensional data has been an area of active research due to the growing exploitation of high dimensional data and the vulnerability of traditional search methods to the curse of dimensionality. This…

Information Retrieval · Computer Science 2015-05-13 Yu Zhong

We present the first sublinear memory sketch that can be queried to find the nearest neighbors in a dataset. Our online sketching algorithm compresses an N element dataset to a sketch of size $O(N^b \log^3 N)$ in $O(N^{(b+1)} \log^3 N)$…

Data Structures and Algorithms · Computer Science 2020-09-15 Benjamin Coleman , Richard G. Baraniuk , Anshumali Shrivastava

Let $k$ be a nonnegative integer. In the approximate $k$-flat nearest neighbor ($k$-ANN) problem, we are given a set $P \subset \mathbb{R}^d$ of $n$ points in $d$-dimensional space and a fixed approximation factor $c > 1$. Our goal is to…

Computational Geometry · Computer Science 2014-11-07 Wolfgang Mulzer , Huy L. Nguyen , Paul Seiferth , Yannik Stein

Longest common subsequence (LCS) is one of the most fundamental problems in combinatorial optimization. Apart from theoretical importance, LCS has enormous applications in bioinformatics, revision control systems, and data comparison…

Data Structures and Algorithms · Computer Science 2020-03-17 MohammadTaghi Hajiaghayi , Masoud Seddighin , Saeed Seddighin , Xiaorui Sun

The simplex algorithm for linear programming is based on the fact that any local optimum with respect to the polyhedral neighborhood is also a global optimum. We show that a similar result carries over to submodular maximization. In…

Data Structures and Algorithms · Computer Science 2017-12-01 Simon Bruggmann , Rico Zenklusen
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