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Automatic segmentation of fine-grained brain structures remains a challenging task. Current segmentation methods mainly utilize 2D and 3D deep neural networks. The 2D networks take image slices as input to produce coarse segmentation in…

Computer Vision and Pattern Recognition · Computer Science 2019-05-08 Yuemeng Li , Hangfan Liu , Hongming Li , Yong Fan

Deep learning is a fast-growing machine learning approach to perceive and understand large amounts of data. In this paper, general information about the deep learning approach which is attracted much attention in the field of machine…

Image and Video Processing · Electrical Eng. & Systems 2018-08-28 Çağrı Kaymak , Ayşegül Uçar

In this paper we propose a deep learning approach for segmenting sub-cortical structures of the human brain in Magnetic Resonance (MR) image data. We draw inspiration from a state-of-the-art Fully-Convolutional Neural Network (F-CNN)…

Computer Vision and Pattern Recognition · Computer Science 2016-02-08 Mahsa Shakeri , Stavros Tsogkas , Enzo Ferrante , Sarah Lippe , Samuel Kadoury , Nikos Paragios , Iasonas Kokkinos

Identifying novel functional protein structures is at the heart of molecular engineering and molecular biology, requiring an often computationally exhaustive search. We introduce the use of a Deep Convolutional Generative Adversarial…

Biomolecules · Quantitative Biology 2021-04-20 Ethan Moyer , Jeff Winchell , Isamu Isozaki , Yigit Alparslan , Mali Halac , Edward Kim

Semantic segmentation is critical to image content understanding and object localization. Recent development in fully-convolutional neural network (FCN) has enabled accurate pixel-level labeling. One issue in previous works is that the FCN…

Computer Vision and Pattern Recognition · Computer Science 2016-07-08 Qin Huang , Chunyang Xia , Wenchao Zheng , Yuhang Song , Hao Xu , C. -C. Jay Kuo

We investigate the addition of symmetry and temporal context information to a deep Convolutional Neural Network (CNN) with the purpose of detecting malignant soft tissue lesions in mammography. We employ a simple linear mapping that takes…

Computer Vision and Pattern Recognition · Computer Science 2017-08-02 Thijs Kooi , Nico Karssemeijer

As recent advances in AI are causing the decline of conventional diagnostic methods, the realization of end-to-end diagnosis is fast approaching. Ultrasound image segmentation is an important step in the diagnostic process. An accurate and…

Computer Vision and Pattern Recognition · Computer Science 2023-08-30 Yuhan Song , Armagan Elibol , Nak Young Chong

Deep convolutional neural networks (CNNs) have shown excellent performance in object recognition tasks and dense classification problems such as semantic segmentation. However, training deep neural networks on large and sparse datasets is…

Computer Vision and Pattern Recognition · Computer Science 2017-12-25 Lorenz Berger , Eoin Hyde , M. Jorge Cardoso , Sebastien Ourselin

Magnetic resonance imaging (MRI) is the non-invasive modality of choice for body tissue composition analysis due to its excellent soft tissue contrast and lack of ionizing radiation. However, quantification of body composition requires an…

Computer Vision and Pattern Recognition · Computer Science 2018-10-16 Ismail Irmakci , Sarfaraz Hussein , Aydogan Savran , Rita R. Kalyani , David Reiter , Chee W. Chia , Kenneth W. Fishbein , Richard G. Spencer , Luigi Ferrucci , Ulas Bagci

Purpose: The purpose of this study is to investigate the robustness of a commonly-used convolutional neural network for image segmentation with respect to visually-subtle adversarial perturbations, and suggest new methods to make these…

Image and Video Processing · Electrical Eng. & Systems 2019-08-05 Zheng Liu , Jinnian Zhang , Varun Jog , Po-Ling Loh , Alan B McMillan

Pixel-wise losses, e.g., cross-entropy or L2, have been widely used in structured prediction tasks as a spatial extension of generic image classification or regression. However, its i.i.d. assumption neglects the structural regularity…

Computer Vision and Pattern Recognition · Computer Science 2019-10-22 Jyh-Jing Hwang , Tsung-Wei Ke , Jianbo Shi , Stella X. Yu

Deep Convolution Neural Networks (CNNs) can easily be fooled by subtle, imperceptible changes to the input images. To address this vulnerability, adversarial training creates perturbation patterns and includes them in the training set to…

Computer Vision and Pattern Recognition · Computer Science 2022-09-19 Muzammal Naseer , Salman Khan , Munawar Hayat , Fahad Shahbaz Khan , Fatih Porikli

Semantic segmentation with deep learning has achieved great progress in classifying the pixels in the image. However, the local location information is usually ignored in the high-level feature extraction by the deep learning, which is…

Computer Vision and Pattern Recognition · Computer Science 2020-01-03 Yi Lu , Yaran Chen , Dongbin Zhao , Jianxin Chen

Automated cardiac segmentation from magnetic resonance imaging datasets is an essential step in the timely diagnosis and management of cardiac pathologies. We propose to tackle the problem of automated left and right ventricle segmentation…

Computer Vision and Pattern Recognition · Computer Science 2017-04-28 Phi Vu Tran

In the last two decades Computer Aided Diagnostics (CAD) systems were developed to help radiologists analyze screening mammograms. The benefits of current CAD technologies appear to be contradictory and they should be improved to be…

Computer Vision and Pattern Recognition · Computer Science 2017-11-10 Dezső Ribli , Anna Horváth , Zsuzsa Unger , Péter Pollner , István Csabai

Medical image segmentation is essential for clinical applications such as disease diagnosis, treatment planning, and disease development monitoring because it provides precise morphological and spatial information on anatomical structures…

Computer Vision and Pattern Recognition · Computer Science 2026-05-01 Moin Safdar , Shahzaib Iqbal , Mubeen Ghafoor , Tariq M. Khan , Imran Razzak , Thantrira Porntaveetus , Hamid Alinejad-Rokny

We propose a machine learning based approach for automatic regularization and polygonization of building segmentation masks. Taking an image as input, we first predict building segmentation maps exploiting generic fully convolutional…

Computer Vision and Pattern Recognition · Computer Science 2020-12-18 Stefano Zorzi , Ksenia Bittner , Friedrich Fraundorfer

This paper proposes a novel image segmentation approachthat integrates fully convolutional networks (FCNs) with a level setmodel. Compared with a FCN, the integrated method can incorporatesmoothing and prior information to achieve an…

Computer Vision and Pattern Recognition · Computer Science 2017-10-25 Min Tang , Sepehr Valipour , Zichen Vincent Zhang , Dana Cobzas , MartinJagersand

Chest X-ray (CXR) is one of the most commonly prescribed medical imaging procedures, often with over 2-10x more scans than other imaging modalities such as MRI, CT scan, and PET scans. These voluminous CXR scans place significant workloads…

Computer Vision and Pattern Recognition · Computer Science 2017-04-11 Wei Dai , Joseph Doyle , Xiaodan Liang , Hao Zhang , Nanqing Dong , Yuan Li , Eric P. Xing

Vessel segmentation is crucial in many medical image applications, such as detecting coronary stenoses, retinal vessel diseases and brain aneurysms. However, achieving high pixel-wise accuracy, complete topology structure and robustness to…

Computer Vision and Pattern Recognition · Computer Science 2023-05-11 Tianyi Shi , Xiaohuan Ding , Wei Zhou , Feng Pan , Zengqiang Yan , Xiang Bai , Xin Yang