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Several studies with brain signals suggested that bottom-up and top-down influences are exerted through distinct frequency bands among visual cortical areas. It has been recently shown that theta and gamma rhythms subserve feedforward,…

Neurons and Cognition · Quantitative Biology 2021-11-24 Leonardo Dalla Porta , Daniel M. Castro , Mauro Copelli , Pedro V. Carelli , Fernanda S. Matias

A search technique locating network modules, i.e., internally densely connected groups of nodes in directed networks is introduced by extending the Clique Percolation Method originally proposed for undirected networks. After giving a…

Physics and Society · Physics 2007-07-18 Gergely Palla , Illes J. Farkas , Peter Pollner , Imre Derenyi , Tamas Vicsek

A simple and accurate relationship is demonstrated that links the average shortest path, nodes, and edges in a complex network. This relationship takes advantage of the concept of link density and shows a large improvement in fitting…

Physics and Society · Physics 2013-04-24 Reginald D. Smith

While for standard percolation directionality is known to increase the combinatorial complexity of percolation, here we show that when connectivity is ensured by paths of length $R\geq 2$, network directionality, impeding backtracking, can…

Disordered Systems and Neural Networks · Physics 2026-05-26 Wenbo Liu , Yiwen Zeng , Xueming Liu , Ginestra Bianconi

Biological networks have two modes. The first mode is static: a network is a passage on which something flows. The second mode is dynamic: a network is a pattern constructed by gluing functions of entities constituting the network. In this…

Category Theory · Mathematics 2012-11-22 Taichi Haruna

We propose a hierarchical training algorithm for standard feed-forward neural networks that adaptively extends the network architecture as soon as the optimization reaches a stationary point. By solving small (low-dimensional) optimization…

Numerical Analysis · Mathematics 2024-10-31 Michael Feischl , Alexander Rieder , Fabian Zehetgruber

We study the effect of adding to a directed chain of interconnected systems a directed feedback from the last element in the chain to the first. The problem is closely related to the fundamental question of how a change in network topology…

Dynamical Systems · Mathematics 2015-05-22 Alexander N. Gorban , Nick Jarman , Erik Steur , Cees van Leeuwen , Ivan Tyukin

Traditional graph analysis focuses on nodes and edges, that is, pairwise relationships. Yet many real-world networks, including biological, social, and communication networks, involve higher-order relationships in which multiple nodes…

General Mathematics · Mathematics 2026-05-15 Heitor Baldo , Luiz A. Baccalá , André Fujita , Koichi Sameshima

Directionality is a fundamental feature of network connections. Most structural brain networks are intrinsically directed because of the nature of chemical synapses, which comprise most neuronal connections. Due to limitations of…

Neurons and Cognition · Quantitative Biology 2018-01-19 Penelope Kale , Andrew Zalesky , Leonardo L. Gollo

Link prediction is a widely studied task in Graph Representation Learning (GRL) for modeling relational data. The early theories in GRL were based on the assumption of a symmetric adjacency matrix, reflecting an undirected setting. As a…

Machine Learning · Computer Science 2025-02-24 Jun Zhai , Muberra Ozmen , Thomas Markovich

Controlling complex networks is of paramount importance in science and engineering. Despite the recent development of structural-controllability theory, we continue to lack a framework to control undirected complex networks, especially…

Physics and Society · Physics 2013-10-23 Zhengzhong Yuan , Chen Zhao , Zengru Di , Wen-Xu Wang , Ying-Cheng Lai

We propose a distributed feedback control that steers a dynamical network to a prescribed equilibrium corresponding to the so-called Cournot-Nash equilibrium. The network dynamics considered here are a class of passive nonlinear…

Optimization and Control · Mathematics 2020-01-28 Claudio De Persis , Nima Monshizadeh

We consider the following problem: Given an undirected (mixed) network and a set of ordered source-target, or cause-effect pairs, direct all edges so as to maximize the number of pairs that admit a directed source-target path. This is…

Data Structures and Algorithms · Computer Science 2017-06-06 Mehdy Roayaei , MohammadReza Razzazi

Networks are one of the most powerful structures for modeling problems in the real world. Downstream machine learning tasks defined on networks have the potential to solve a variety of problems. With link prediction, for instance, one can…

Machine Learning · Computer Science 2019-11-27 Nino Arsov , Georgina Mirceva

The irreducible complexity of natural phenomena has led Graph Neural Networks to be employed as a standard model to perform representation learning tasks on graph-structured data. While their capacity to capture local and global patterns is…

Machine Learning · Computer Science 2024-02-13 Lorenzo Giusti

Communication of signals among nodes in a complex network poses fundamental problems of efficiency and cost. Routing of messages along shortest paths requires global information about the topology, while spreading by diffusion, which…

Neurons and Cognition · Quantitative Biology 2019-06-19 Andrea Avena-Koenigsberger , Xiaoran Yan , Artemy Kolchinsky , Martijn van den Heuvel , Patric Hagmann , Olaf Sporns

A directed graph is oriented if it can be obtained by orienting the edges of a simple, undirected graph. For an oriented graph $G$, let $\beta(G)$ denote the size of a minimum feedback arc set, a smallest subset of edges whose deletion…

Combinatorics · Mathematics 2022-04-20 Jacob Fox , Zoe Himwich , Nitya Mani

Target control of directed networks, which aims to control only a target subset instead of the entire set of nodes in large natural and technological networks, is an outstanding challenge faced in various real world applications. We address…

Systems and Control · Computer Science 2018-11-30 Guoqi Li , Xumin Chen , Pei Tang , Gaoxi Xiao , Changyun Wen , Luping Shi

Complex networks are graphs representing real-life systems that exhibit unique characteristics not found in purely regular or completely random graphs. The study of such systems is vital but challenging due to the complexity of the…

Social and Information Networks · Computer Science 2022-07-18 Hafida Benhidour , Lama Almeshkhas , Said Kerrache

Networks are often characterized by node heterogeneity for which nodes exhibit different degrees of interaction and link homophily for which nodes sharing common features tend to associate with each other. In this paper, we propose a new…

Methodology · Statistics 2018-03-13 Ting Yan , Binyan Jiang , Stephen E. Fienberg , Chenlei Leng
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