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The myriad microscopic interactions among the individual organisms that constitute an ecological system collectively give rise, at the macroscopic scale, to evolutionary trends. The ability to detect the directionality of such trends is…

Populations and Evolution · Quantitative Biology 2025-07-21 Andrea Marchetti , Henrik Jeldtoft Jensen

Ecological networks describe the interactions between different species, informing us of how they rely on one another for food, pollination and survival. If a species in an ecosystem is under threat of extinction, it can affect other…

Populations and Evolution · Quantitative Biology 2023-07-06 Chris Jones , Damaris Zurell , Karoline Wiesner

Ecologists have long suspected that species are more likely to interact if their traits match in a particular way. For example, a pollination interaction may be more likely if the proportions of a bee's tongue fit a plant's flower shape.…

Populations and Evolution · Quantitative Biology 2019-11-05 Maximilian Pichler , Virginie Boreux , Alexandra-Maria Klein , Matthias Schleuning , Florian Hartig

It has been observed that mutualistic bipartite networks have a nested structure of interactions. In addition, the degree distributions associated with the two guilds involved in such networks (e.g. plants & pollinators or plants & seed…

Populations and Evolution · Quantitative Biology 2007-09-20 Diego Medan , Roberto P. J. Perazzo , Mariano Devoto , Enrique Burgos , Martin G. Zimmermann , Horacio Ceva , Ana M. Delbue

Systems of dynamical interactions between competing species can be used to model many complex systems, and can be mathematically described by {\em random} networks. Understanding how patterns of activity arise in such systems is important…

Adaptation and Self-Organizing Systems · Physics 2016-01-21 Nick McCullen , Thomas Wagenknecht

James et al. (2012) presented simulations that apparently falsify the analytical result by Bastolla et al. (2009), who showed that nested mutualistic interactions decrease interspecific competition and increase biodiversity in model…

Populations and Evolution · Quantitative Biology 2013-01-17 Rudolf P. Rohr , Miguel A. Fortuna , Bartolo Luque , Jordi Bascompte

Nestedness is a common property of communication, finance, trade, and ecological networks. In networks with high levels of nestedness, the link positions of low-degree nodes (those with few links) form nested subsets of the link positions…

Physics and Society · Physics 2023-12-19 Phillip P. A. Staniczenko , Debabrata Panja

Ecological networks allow us to study the structure and function of ecosystems and gain insights on species resilience/stability. The study of this ecological networks is usually a snapshop focused in a limited specific range of space and…

Populations and Evolution · Quantitative Biology 2014-07-17 Andrzej Jarynowski , Fco. Alejandro Lopez-Nunez , Han Fan

We study the evolution of the network properties of a populated network embedded in a genotype space characterised by either a low or a high number of potential links, with particular emphasis on the connectivity and clustering. Evolution…

Statistical Mechanics · Physics 2007-05-23 Paul Anderson , Henrik Jeldtoft Jensen

Patterns of nestedness and specialization asymmetry, where specialist species interact mainly with generalists while generalists interact with both generalists and specialists, are often observed in mutualistic and antagonistic bi-partite…

Populations and Evolution · Quantitative Biology 2013-02-26 C. Finn McQuaid , Nicholas F. Britton

In this work we present a dynamical model that succesfully describes the organization of mutualistic ecological systems. The main characteristic of these systems is the nested structure of the bipartite adjacency matrix describing their…

Physics and Society · Physics 2009-11-13 Enrique Burgos , Horacio Ceva , Laura Hernandez , R. P. J. Perazzo

Ecological networks exhibit non-random structural patterns, such as modularity and nestedness, which indicate ecosystem stability, species diversity, and connectance. Such structure-stability relationships are well known. However, another…

Populations and Evolution · Quantitative Biology 2014-06-12 Kazuhiro Takemoto , Saori Kanamaru , Wenfeng Feng

Mutualism is a biological interaction mutually beneficial for both species involved, such as the interaction between plants and their pollinators. Real mutualistic communities can be understood as weighted bipartite networks and they…

Populations and Evolution · Quantitative Biology 2014-03-24 Manuel Jiménez-Martín , Juan Manuel Pastor , Juan Carlos Losada , Javier Galeano

Systems composed of distinct complex networks are present in many real-world environments, from society to ecological systems. In the present paper, we propose a network model obtained as a consequence of interactions between two species…

Biological Physics · Physics 2007-08-08 Luis Enrique Correa da Rocha , Luciano da Fontoura Costa

We study how the community structure of bipartite mutualistic networks changes in a dynamic context. First, we consider a real mutualistic network and introduce extinction events according to several scenarios. We model extinctions as node…

Physics and Society · Physics 2019-06-04 Somaye Sheykhali , Juan Fernández-Gracia , Anna Traveset , Víctor M. Eguíluz

We use a generalised version of the individual-based Tangled Nature model of evolutionary ecology to study the relationship between ecosystem structure and evolutionary history. Our evolved model ecosystems typically exhibit interaction…

Populations and Evolution · Quantitative Biology 2007-05-23 Simon Laird , Henrik Jeldtoft Jensen

Nestedness characterizes the linkage pattern of networked systems, indicating the likelihood that a node is linked to the nodes linked to the nodes with larger degrees than it. Networks of mutualistic relationship between distinct groups of…

Physics and Society · Physics 2012-03-13 Deok-Sun Lee , Seong Eun Maeng , Jae Woo Lee

Mutualistic networks have attracted increasing attention in the ecological literature in the last decades as they play a key role in the maintenance of biodiversity. Here, we develop an analytical framework to study the structural stability…

Physics and Society · Physics 2021-02-05 Xiangrong Wang , Thomas Peron , Johan L. A. Dubbeldam , Sonia Kèfi , Yamir Moreno

This study investigates the prevalence and implications of nestedness within primate social networks, examining its relationship with cognitive and structural factors. We analysed data from 51 primate groups across 21 species, employing…

The networks of predator-prey interactions in ecological systems are remarkably complex, but nevertheless surprisingly stable in terms of long term persistence of the system as a whole. In order to understand the mechanism driving the…

Populations and Evolution · Quantitative Biology 2015-06-05 Korinna T. Allhoff , Daniel Ritterskamp , Björn C. Rall , Barbara Drossel , Christian Guill