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Related papers: Time-delayed model of RNA interference

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Background: MicroRNAs (miRNAs) play multiple roles in tumor biology [1]. Interestingly, reports from multiple groups suggest that miRNA targets may be coupled through competitive stoichiometric sequestration [2]. Specifically, computational…

In this paper, time delay estimation techniques robust to narrowband interference (NBI) are proposed. Owing to the deluge of wireless signal interference these days, narrowband interference is a common problem for communication and…

Information Theory · Computer Science 2015-12-29 TaeJin Park , Kyeong Ok Kang

When an infectious disease propagates throughout society, the incidence function may rise at first due to an increase in pathogenicity and then decrease due to inhibitory effects until it reaches saturation. Effective vaccination and…

Dynamical Systems · Mathematics 2023-07-11 Sushil Pathak , G. Shirisha , K. Venkata Ratnam

Reaction-diffusion systems with time-delay defined on complex networks have been studied in the framework of the emergence of Turing instabilities. The use of the Lambert W-function allowed us get explicit analytic conditions for the onset…

Statistical Mechanics · Physics 2016-08-03 Julien Petit , Malbor Asllani , Duccio Fanelli , Ben Lauwens , Timoteo Carletti

In this paper, we study the dynamics and stability of a fundamental power system model when a time delay is imposed on the excitation of the generator. It is observed that sustained oscillations can arise in an otherwise stable power system…

Chaotic Dynamics · Physics 2007-05-23 Rajesh G. Kavasseri

The elapsed-time model describes the behavior of interconnected neurons through the time since their last spike. It is an age-structured non-linear equation in which age corresponds to the elapsed time since the last discharge, and models…

Dynamical Systems · Mathematics 2025-04-28 María J. Cáceres , José A Cañizo , Nicolas Torres

We study a mathematical model describing the dynamics of a pluripotent stem cell population involved in the blood production process in the bone marrow. This model is a differential equation with a time delay. The delay describes the cell…

Analysis of PDEs · Mathematics 2009-04-17 Mostafa Adimy , Fabien Crauste , Shigui Ruan

Transcriptional delay can significantly impact the dynamics of gene networks. Here we examine how such delay affects bistable systems. We investigate several stochastic models of bistable gene networks and find that increasing delay…

Molecular Networks · Quantitative Biology 2015-06-16 Chinmaya Gupta , José Manuel López , William Ott , Krešimir Josíc , Matthew R. Bennett

We consider the model of interaction between the immune system and tumor cells including a memory function that reflect the influence of the past states, to simulate the time needed by the latter to develop a chemical and cell mediated…

Dynamical Systems · Mathematics 2007-05-23 G. Mircea , M. Neamtu , R. F. Horhat , D. Opris

In this paper, we develop a dynamic model of HIV infection that incorporates latent hosts, cytotoxic T lymphocyte (CTL) immunity, saturated incidence rates, and two transmission mechanisms: virus-to-cell and cell-to-cell transmission. The…

Dynamical Systems · Mathematics 2025-11-25 Songbo Hou , Xinxin Tian

Transcription and translation retrieve and operationalize gene encoded information in cells. These processes are not instantaneous and incur significant delays. In this paper we study Goodwin models of both inducible and repressible operons…

Dynamical Systems · Mathematics 2022-03-22 Tomas Gedeon , Antony R. Humphries , Michael C. Mackey , Hans-Otto Walther , Zhao , Wang

The effects of intrinsic noise on stochastic delay systems is studied within an expansion in the inverse system size. We show that the stochastic nature of the underlying dynamics may induce oscillatory behaviour in parameter ranges where…

Molecular Networks · Quantitative Biology 2015-05-13 Tobias Galla

Gene expression is a random or noisy process. The process consists of several random events among which the reinitiation of transcription by RNAP is an important one. The RNAP molecules can bind the gene only after the promoter gets…

Molecular Networks · Quantitative Biology 2020-08-26 Rajesh Karmakar

RNA interference, particularly siRNA induced gene silencing is becoming an important avenue of modern therapeutics. The siRNA is delivered to the cells as short double helical RNA which becomes single stranded for forming the RISC complex.…

Biomolecules · Quantitative Biology 2019-10-10 Rakesh K Mishra , Sanchita Mukherjee , Dhananjay Bhattacharyya

This article proposes a non-autonomous mathematical model with delay for confrontation between two countries, and examines the stability of its equilibrium state. Our criteria for stability take into account the influence of the factor of…

Dynamical Systems · Mathematics 2026-05-14 Teresa Faria , Anatoliy A. Martynyuk

RNA folding is a kinetic process governed by the competition of a large number of structures stabilized by the transient formation of base pairs that may induce complex folding pathways and the formation of misfolded structures. Despite of…

Biological Physics · Physics 2009-03-16 M. Manosas , I. Junier , F. Ritort

Effects of immune delay on symmetric dynamics are investigated within a model of antigenic variation in malaria. Using isotypic decomposition of the phase space, stability problem is reduced to the analysis of a cubic transcendental…

Chaotic Dynamics · Physics 2012-09-21 K. B. Blyuss , Y. N. Kyrychko

MicroRNAs (miRNAs) are small RNA molecules, about 22 nucleotide long, which post-transcriptionally regulate their target messenger RNAs (mRNAs). They accomplish key roles in gene regulatory networks, ranging from signaling pathways to…

Molecular Networks · Quantitative Biology 2012-10-09 Carla Bosia , Andrea Pagnani , Riccardo Zecchina

The aim of this paper is to study the steady states of the mathematical models with delay kernels which describe pathogen-immune dynamics of many kinds of infectious diseases. In the study of mathematical models of infectious diseases it is…

Dynamical Systems · Mathematics 2007-05-23 M. Neamtu , L. Buliga , F. R. Horhat , D. Opris , A. T. Ceausu

Intrinsic transcriptional noise induced by operator fluctuations is investigated with a simple spin like stochastic model. The effects of transcriptional fluctuations in protein synthesis is probed by coupling transcription and translation…

Other Quantitative Biology · Quantitative Biology 2007-05-23 Guilherme da C. P. Innocentini , Jose E. M. Hornos