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As a unification of increasing trees and plane trees, the weakly increasing trees labeled by a multiset was introduced by Lin-Ma-Ma-Zhou in 2021. Motived by some symmetries in plane trees proved recently by Dong, Du, Ji and Zhang, we…

Combinatorics · Mathematics 2025-02-14 Yang Li , Zhicong Lin

Applying a method to reconstruct a phylogenetic tree from random data provides a way to detect whether that method has an inherent bias towards certain tree `shapes'. For maximum parsimony, applied to a sequence of random 2-state data, each…

Populations and Evolution · Quantitative Biology 2014-06-03 Mareike Fischer , Michelle Galla , Lina Herbst , Mike Steel

In this paper, we study the generating functions for the number of pattern restricted Stirling permutations with a given number of plateaus, descents and ascents. Properties of the generating functions, including symmetric properties and…

Combinatorics · Mathematics 2016-07-21 David Callan , Shi-Mei Ma , Toufik Mansour

We generalize the concept of ascending and descending runs from permutations to rooted labelled trees and mappings, i.e., functions from the set $\{1, \dots, n\}$ into itself. A combinatorial decomposition of the corresponding functional…

Combinatorics · Mathematics 2020-07-06 Marie-Louise Lackner , Alois Panholzer

A di-sk tree is a rooted binary tree whose nodes are labeled by $\oplus$ or $\ominus$, and no node has the same label as its right child. The di-sk trees are in natural bijection with separable permutations. We construct a combinatorial…

Combinatorics · Mathematics 2021-09-15 Shishuo Fu , Zhicong Lin , Yaling Wang

Plane increasing trees are rooted labeled trees embedded into the plane such that the sequence of labels is increasing on any branch starting at the root. Relaxed binary trees are a subclass of unlabeled directed acyclic graphs. We…

Combinatorics · Mathematics 2018-07-12 Michael Wallner

Understanding the evolution of binary traits, which affects the birth and survival of species and also the rate of molecular evolution, remains challenging. A typical example is the evolution of mating systems in plant species. In this…

Populations and Evolution · Quantitative Biology 2017-04-04 Daniah Tahir , Sylvain Glémin , Martin Lascoux , Ingemar Kaj

In this paper, we focus on the enumeration of permutations by number of cyclic occurrence of peaks and valleys. We find several recurrence relations involving the number of permutations with a prescribed number of cyclic peaks, cyclic…

Combinatorics · Mathematics 2012-12-14 Shi-Mei Ma , Chak-On Chow

The subject of pattern avoiding permutations has its roots in computer science, namely in the problem of sorting a permutation through a stack. A formula for the number of permutations of length n that can be sorted by passing it twice…

Combinatorics · Mathematics 2010-03-26 Anders Claesson , Sergey Kitaev , Einar Steingrimsson

Working with generating functions, the combinatorics of a recurrence relation can be expressed in a way that allows for more efficient calculation of the quantity. This is true of the Catalan numbers for an ordered binary tree…

Combinatorics · Mathematics 2025-03-05 David Serena , William J Buchanan

We introduce some natural families of distributions on rooted binary ranked plane trees with a view toward unifying ideas from various fields, including macroevolution, epidemiology, computational group theory, search algorithms and other…

Combinatorics · Mathematics 2017-08-22 Sean Cleary , Mareike Fischer , Robert C. Griffiths , Raazesh Sainudiin

The precise analysis of the variance of the profile of a suffix tree has been a longstanding open problem. We analyze three regimes of the asymptotic growth of the variance of the profile of a suffix tree built from a randomly generated…

Data Structures and Algorithms · Computer Science 2016-05-16 Jeffrey Gaither , Mark Daniel Ward

A nice factorization is given for the characteristic polynomials of intervals in some posets of leaf-labeled forests of rooted binary trees.

Combinatorics · Mathematics 2011-03-31 Frederic Chapoton

We consider the distribution of ascents, descents, peaks, valleys, double ascents, and double descents over permutations avoiding a set of patterns. Many of these statistics have already been studied over sets of permutations avoiding a…

Combinatorics · Mathematics 2019-07-24 Michael Bukata , Ryan Kulwicki , Nicholas Lewandowski , Lara Pudwell , Jacob Roth , Teresa Wheeland

Trees or rooted trees have been generously studied in the literature. A forest is a set of trees or rooted trees. Here we give recurrence relations between the number of some kind of rooted forest with $k$ roots and that with $k+1$ roots on…

Combinatorics · Mathematics 2017-02-08 Song Guo , Victor J. W. Guo

Bona [2007+] studied the distribution of ascents, plateaux and descents in the class of Stirling permutations, introduced by Gessel and Stanley [1978]. Recently, Janson [2008+] showed the connection between Stirling permutations and plane…

Combinatorics · Mathematics 2008-05-28 Svante Janson , Markus Kuba , Alois Panholzer

There is a deep connection between permutations and trees. Certain sub-structures of permutations, called sub-permutations, bijectively map to sub-trees of binary increasing trees. This opens a powerful tool set to study enumerative and…

Combinatorics · Mathematics 2014-07-02 Filippo Disanto , Thomas Wiehe

The forest of mutations associated to a multitype branching forest is obtained by merging together all vertices of its clusters and by preserving connections between them. We first show that the forest of mutations of any mulitype branching…

Probability · Mathematics 2015-10-06 Loïc Chaumont , Thi Ngoc Anh Nguyen

We study the influence of the seed in random trees grown according to the uniform attachment model, also known as uniform random recursive trees. We show that different seeds lead to different distributions of limiting trees from a total…

Probability · Mathematics 2014-10-22 Sébastien Bubeck , Ronen Eldan , Elchanan Mossel , Miklós Z. Rácz

This extended abstract is dedicated to the analysis of the height of non-plane unlabelled rooted binary trees. The height of such a tree chosen uniformly among those of size $n$ is proved to have a limiting theta distribution, both in a…

Combinatorics · Mathematics 2008-07-16 Nicolas Broutin , Philippe Flajolet