Related papers: Bidirectional LSTM-CRF for Clinical Concept Extrac…
In this paper, we study bidirectional LSTM network for the task of text classification using both supervised and semi-supervised approaches. Several prior works have suggested that either complex pretraining schemes using unsupervised…
Overall, the two main contributions of this work include the application of sentence simplification to association extraction as described above, and the use of distributional semantics for concept extraction. The proposed work on concept…
Identifying patient cohorts is fundamental to numerous healthcare tasks, including clinical trial recruitment and retrospective studies. Current cohort retrieval methods in healthcare organizations rely on automated queries of structured…
Recognition of handwritten words continues to be an important problem in document analysis and recognition. Existing approaches extract hand-engineered features from word images--which can perform poorly with new data sets. Recently, deep…
CRF has been used as a powerful model for statistical sequence labeling. For neural sequence labeling, however, BiLSTM-CRF does not always lead to better results compared with BiLSTM-softmax local classification. This can be because the…
The growing quantity and complexity of data pose challenges for humans to consume information and respond in a timely manner. For businesses in domains with rapidly changing rules and regulations, failure to identify changes can be costly.…
Thematic analysis (TA) is widely used in health research to extract patterns from patient interviews, yet manual TA faces challenges in scalability and reproducibility. LLM-based automation can help, but existing approaches produce…
Automatic segmentation of fine-grained brain structures remains a challenging task. Current segmentation methods mainly utilize 2D and 3D deep neural networks. The 2D networks take image slices as input to produce coarse segmentation in…
Pixel-level labelling tasks, such as semantic segmentation, play a central role in image understanding. Recent approaches have attempted to harness the capabilities of deep learning techniques for image recognition to tackle pixel-level…
Causality extraction from natural language texts is a challenging open problem in artificial intelligence. Existing methods utilize patterns, constraints, and machine learning techniques to extract causality, heavily depending on domain…
Recurrent Neural Networks (RNNs) are widely used in the field of natural language processing (NLP), ranging from text categorization to question answering and machine translation. However, RNNs generally read the whole text from beginning…
Clinical texts, represented in electronic medical records (EMRs), contain rich medical information and are essential for disease prediction, personalised information recommendation, clinical decision support, and medication pattern mining…
Today, we are seeing an ever-increasing number of clinical notes that contain clinical results, images, and textual descriptions of patient's health state. All these data can be analyzed and employed to cater novel services that can help…
The clinical named entity recognition (CNER) task seeks to locate and classify clinical terminologies into predefined categories, such as diagnostic procedure, disease disorder, severity, medication, medication dosage, and sign symptom.…
Due to recent technical and scientific advances, we have a wealth of information hidden in unstructured text data such as offline/online narratives, research articles, and clinical reports. To mine these data properly, attributable to their…
In this paper we present a clean, yet effective, model for word sense disambiguation. Our approach leverage a bidirectional long short-term memory network which is shared between all words. This enables the model to share statistical…
Deep learning-based medical image classification techniques are rapidly advancing in medical image analysis, making it crucial to develop accurate and trustworthy models that can be efficiently deployed across diverse clinical scenarios.…
Cortical circuits exhibit intricate recurrent architectures that are remarkably similar across different brain areas. Such stereotyped structure suggests the existence of common computational principles. However, such principles have…
Recurrent neural networks (RNN) are at the core of modern automatic speech recognition (ASR) systems. In particular, long-short term memory (LSTM) recurrent neural networks have achieved state-of-the-art results in many speech recognition…
Addressing the complexity of accurately classifying International Classification of Diseases (ICD) codes from medical discharge summaries is challenging due to the intricate nature of medical documentation. This paper explores the use of…