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We study the channel coding problem when errors and uncertainty occur in the encoding process. For simplicity we assume the channel between the encoder and the decoder is perfect. Focusing on linear block codes, we model the encoding…

Information Theory · Computer Science 2013-05-17 Jad Hachem , I-Hsiang Wang , Christina Fragouli , Suhas Diggavi

Exploring and understanding the protein-folding problem has been a long-standing challenge in molecular biology. Here, using molecular dynamics simulation, we reveal how parallel distributed adjacent planar peptide groups of unfolded…

Biomolecules · Quantitative Biology 2019-01-11 Xiaoliang Ma , Chengyu Hou , Liping Shi , Long Li , Jiacheng Li , Lin Ye , Lin Yang , Xiaodong He

The study of finite approximations of probability measures has a long history. In (Xu and Berger, 2017), the authors focus on constrained finite approximations and, in particular, uniform ones in dimension $d=1$. The present paper gives an…

Probability · Mathematics 2018-01-10 Julien Chevallier

Molecular representations are inherently task-dependent, yet most pre-trained molecular encoders are not. Task conditioning promises representations that reorganize based on task descriptions, but existing approaches rely on expensive…

Chemical Physics · Physics 2026-02-05 Gordan Prastalo , Kevin Maik Jablonka

We investigate the use of sparse coding and dictionary learning in the context of multitask and transfer learning. The central assumption of our learning method is that the tasks parameters are well approximated by sparse linear…

Machine Learning · Computer Science 2014-06-17 Andreas Maurer , Massimiliano Pontil , Bernardino Romera-Paredes

We propose the Manifold Function Encoder (MFE) for identifying different functions defined on different manifolds. Both a manifold in Euclidean space and a function defined on this manifold can be viewed as bounded linear functionals on a…

Numerical Analysis · Mathematics 2025-12-24 Jun Hu , Pengzhan Jin , Weijun Zhang

Superoptimization requires the estimation of the best program for a given computational task. In order to deal with large programs, superoptimization techniques perform a stochastic search. This involves proposing a modification of the…

Machine Learning · Computer Science 2016-12-06 Rudy Bunel , Alban Desmaison , M. Pawan Kumar , Philip H. S. Torr , Pushmeet Kohli

We describe an asynchronous parallel stochastic proximal coordinate descent algorithm for minimizing a composite objective function, which consists of a smooth convex function plus a separable convex function. In contrast to previous…

Optimization and Control · Mathematics 2015-12-14 Ji Liu , Stephen J. Wright

One of the most intriguing results of single molecule experiments on proteins and nucleic acids is the discovery of functional heterogeneity: the observation that complex cellular machines exhibit multiple, biologically active…

Biomolecules · Quantitative Biology 2022-10-12 Michael Hinczewski , Changbong Hyeon , D. Thirumalai

Proving capacity for networks without feedback or cooperation usually involves two fundamental random coding techniques: superposition coding and binning. Although conceptually very different, these two techniques often achieve the same…

Information Theory · Computer Science 2012-02-08 Stefano Rini

We frame the problem of selecting an optimal audio encoding scheme as a supervised learning task. Through uniform convergence theory, we guarantee approximately optimal codec selection while controlling for selection bias. We present…

Sound · Computer Science 2018-12-20 Clayton Sanford , Cyrus Cousins , Eli Upfal

Consider a distributed coding for computing problem with constant decoding locality, i.e., with a vanishing error probability, any single sample of the function can be approximately recovered by probing only constant number of compressed…

Information Theory · Computer Science 2024-03-01 Deheng Yuan , Tao Guo , Zhongyi Huang , Shi Jin

We study various asymptotic approximations of Good's special functions arising in atomic physics. These special functions are situated beyond Anger's functions to which they are closely related. Our major tool is the method of the…

Classical Analysis and ODEs · Mathematics 2021-05-19 David Békollè , Aline Bonami , Moïse Kwato Njock

We propose a decoder for Trellis-Constrained Codes, a super-class of Turbo- and LDPC codes. Inspired by amplitude amplification from quantum computing, we attempt to amplify the relative likelihood of the most likely codeword until it…

Information Theory · Computer Science 2019-10-29 Christian Franck

We examine functions representing the cumulative probability of a binomial random variable exceeding a threshold, expressed in terms of the success probability per trial. These functions are known to exhibit a unique inflection point. We…

Theoretical Economics · Economics 2025-07-31 Srinivas Arigapudi , Yuval Heller , Amnon Schreiber

Unsupervised anomaly detection (UAD) learns one-class classifiers exclusively with normal (i.e., healthy) images to detect any abnormal (i.e., unhealthy) samples that do not conform to the expected normal patterns. UAD has two main…

Computer Vision and Pattern Recognition · Computer Science 2021-07-01 Yu Tian , Guansong Pang , Fengbei Liu , Yuanhong chen , Seon Ho Shin , Johan W. Verjans , Rajvinder Singh , Gustavo Carneiro

In this paper, we present a simple technique to approximate the performance union bound of a punctured turbo code. The bound approximation exploits only those terms of the transfer function that have a major impact on the overall…

Information Theory · Computer Science 2022-03-08 Ioannis Chatzigeorgiou , Miguel R. D. Rodrigues , Ian J. Wassell , Rolando Carrasco

Boolean formulae compactly encode huge, constrained search spaces. Thus, variability-intensive systems are often encoded with Boolean formulae. The search space of a variability-intensive system is usually too large to explore without…

Logic in Computer Science · Computer Science 2025-03-19 Olivier Zeyen , Maxime Cordy , Martin Gubri , Gilles Perrouin , Mathieu Acher

Probabilistic programming is a growing area that strives to make statistical analysis more accessible, by separating probabilistic modelling from probabilistic inference. In practice this decoupling is difficult. No single inference…

Programming Languages · Computer Science 2022-04-15 Maria I. Gorinova

In this paper we study the adaptivity of submodular maximization. Adaptivity quantifies the number of sequential rounds that an algorithm makes when function evaluations can be executed in parallel. Adaptivity is a fundamental concept that…

Data Structures and Algorithms · Computer Science 2018-04-18 Eric Balkanski , Aviad Rubinstein , Yaron Singer