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HyperNetX (HNX) is an open source Python library for the analysis and visualization of complex network data modeled as hypergraphs. Initially released in 2019, HNX facilitates exploratory data analysis of complex networks using algebraic…

Mathematical Software · Computer Science 2023-10-19 Brenda Praggastis , Sinan Aksoy , Dustin Arendt , Mark Bonicillo , Cliff Joslyn , Emilie Purvine , Madelyn Shapiro , Ji Young Yun

We present a brief introduction to a flexible, general network inference framework which models data as a network space, sampled to optimize network structure to a particular task. We introduce a formal problem statement related to…

Social and Information Networks · Computer Science 2017-05-03 Ivan Brugere , Chris Kanich , Tanya Y. Berger-Wolf

Nature-inspired optimization Algorithms (NIOAs) are nowadays a popular choice for community detection in social networks. Community detection problem in social network is treated as optimization problem, where the objective is to either…

Social and Information Networks · Computer Science 2022-12-22 Soumita Das , Bijita Singha , Alberto Tonda , Anupam Biswas

Neuron analysis provides insights into how knowledge is structured in representations and discovers the role of neurons in the network. In addition to developing an understanding of our models, neuron analysis enables various applications…

Computation and Language · Computer Science 2023-05-29 Fahim Dalvi , Hassan Sajjad , Nadir Durrani

Existing network simulations often rely on simplistic models that send packets at random intervals, failing to capture the critical role of application-level behaviour. This paper presents a statistical approach that extracts and models…

Networking and Internet Architecture · Computer Science 2025-02-04 Murugaraj Odiathevar , Kim Chung Yup

Learning-based Network Intrusion Detection Systems (NIDSs) are widely deployed for defending various cyberattacks. Existing learning-based NIDS mainly uses Neural Network (NN) as a classifier that relies on the quality and quantity of…

Cryptography and Security · Computer Science 2022-01-11 Tian Dong , Song Li , Han Qiu , Jialiang Lu

The ability to analyze network threats is very important in security research. Traditional approaches, involving sandboxing technology are limited to simulating a single host, missing local network attacks. This issue is addressed by…

Cryptography and Security · Computer Science 2020-07-17 Francisc Moldovan , Ciprian Oprisa

The prevailing approaches in Network Intrusion Detection Systems (NIDS) are often hampered by issues such as high resource consumption, significant computational demands, and poor interpretability. Furthermore, these systems generally…

Cryptography and Security · Computer Science 2024-06-04 Alice Bizzarri , Chung-En Yu , Brian Jalaian , Fabrizio Riguzzi , Nathaniel D. Bastian

We present Conedy, a performant scientific tool to numerically investigate dynamics on complex networks. Conedy allows to create networks and provides automatic code generation and compilation to ensure performant treatment of arbitrary…

Computational Physics · Physics 2015-06-04 Alexander Rothkegel , Klaus Lehnertz

Link prediction is one of the fundamental problems in computational social science. A particularly common means to predict existence of unobserved links is via structural similarity metrics, such as the number of common neighbors; node…

Social and Information Networks · Computer Science 2019-01-01 Kai Zhou , Tomasz P. Michalak , Talal Rahwan , Marcin Waniek , Yevgeniy Vorobeychik

NIMS-OS (NIMS Orchestration System) is a Python library created to realize a closed loop of robotic experiments and artificial intelligence (AI) without human intervention for automated materials exploration. It uses various combinations of…

Materials Science · Physics 2026-04-30 Ryo Tamura , Koji Tsuda , Shoichi Matsuda

Network Intrusion Detection Systems (NIDSs) detect intrusion attacks in network traffic. In particular, machine-learning-based NIDSs have attracted attention because of their high detection rates of unknown attacks. A distributed processing…

Cryptography and Security · Computer Science 2024-05-24 Maho Kajiura , Junya Nakamura

Network analysis is currently used in a myriad of contexts: from identifying potential drug targets to predicting the spread of epidemics and designing vaccination strategies, and from finding friends to uncovering criminal activity.…

Data Analysis, Statistics and Probability · Physics 2010-04-28 R. Guimera , M. Sales-Pardo

This paper proposes a framework called Watts for implementing, comparing, and recombining open-ended learning (OEL) algorithms. Motivated by modularity and algorithmic flexibility, Watts atomizes the components of OEL systems to promote the…

Artificial Intelligence · Computer Science 2022-04-29 Aaron Dharna , Charlie Summers , Rohin Dasari , Julian Togelius , Amy K. Hoover

In this paper, we proposed the \textit{link injection}, a novel method that helps any differentiable graph machine learning models to go beyond observed connections from the input data in an end-to-end learning fashion. It finds out (weak)…

Social and Information Networks · Computer Science 2020-09-10 Jie Bu , M. Maruf , Arka Daw

Bayesian Networks (BNs) have become increasingly popular over the last few decades as a tool for reasoning under uncertainty in fields as diverse as medicine, biology, epidemiology, economics and the social sciences. This is especially true…

Machine Learning · Computer Science 2022-10-27 Neville K. Kitson , Anthony C. Constantinou , Zhigao Guo , Yang Liu , Kiattikun Chobtham

RSNet is an open-source R package that provides a resampling-based framework for robust and interpretable network inference, designed to address the limited-sample-size challenges common in high-dimensional data. It supports both the…

Machine Learning · Computer Science 2026-05-14 Ziwei Huang , Zeyuan Song , Paola Sebastiani , Stefano Monti

The proliferation of spectroscopic data across various scientific and engineering fields necessitates automated processing. We introduce OASIS (Omni-purpose Analysis of Spectra via Intelligent Systems), a machine learning (ML) framework for…

Machine Learning · Computer Science 2025-09-16 Chris Young , Juejing Liu , Marie L. Mortensen , Yifu Feng , Elizabeth Li , Zheming Wang , Xiaofeng Guo , Kevin M. Rosso , Xin Zhang

How should we gather information in a network, where each node's visibility is limited to its local neighborhood? This problem arises in numerous real-world applications, such as surveying and task routing in social networks, team formation…

Artificial Intelligence · Computer Science 2015-05-07 Adish Singla , Eric Horvitz , Pushmeet Kohli , Ryen White , Andreas Krause

This paper proposes a web-based visual graph analytics platform for interactive graph mining, visualization, and real-time exploration of networks. GraphVis is fast, intuitive, and flexible, combining interactive visualizations with…

Social and Information Networks · Computer Science 2015-02-03 Nesreen K. Ahmed , Ryan A. Rossi