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A detailed understanding of the interface between living cells and substrate materials is of rising importance in many fields of medicine, biology and biotechnology. Cells at interfaces often form epithelia. The physical barrier that they…

As small particles skim our airways during breathing, or our intestines during digestion, the surface epithelium is subjected to local exogenous shear that deforms hundreds to thousands of tightly interacting cells. Unlike shear…

Biological Physics · Physics 2026-01-01 Shahar Nahum , Adi Y. Elkabetz , Matan Elbaz , Liav Daraf , Yael Lavi , Lior Atia

Epithelial morphogenesis, a signature problem of tissue biology and tissue mechanics, continues to inspire biologists and physicists alike. Many treatments focus on tissue fluidization, apical/basal ratio changes, or mechanical…

Biological Physics · Physics 2023-07-26 Carlos M. Duque , Carl D. Modes

We derive a continuum mechanical model to capture the morphological changes occurring at the pretumoral stage of epithelial tissues. The proposed model aims to investigate the competition between the bulk elasticity of the epithelium and…

Soft Condensed Matter · Physics 2021-07-27 Antonino Favata , Roberto Paroni , Filippo Recrosi , Giuseppe Tomassetti

The collective migration of epithelial groups of cells plays a central role in processes such as embryo development, wound healing, and cancer invasion. While finite cell clusters are known to collectively migrate in response to external…

We present a minimal continuum model of strongly adhering cells as active contractile isotropic media and use the model to study the effect of the geometry of the adhesion patch in controlling the spatial distribution of traction and…

Soft Condensed Matter · Physics 2015-06-12 Shiladitya Banerjee , M. Cristina Marchetti

In Part I of this article we have developed a novel mechanobiological model of a Tissue Engineering process that accounts for the mechanisms through which an isotropic or anisotropic adherence condition regulates the active functions of the…

Numerical Analysis · Mathematics 2015-12-14 Chiara Lelli , Riccardo Sacco , Paola Causin , Manuela T. Raimondi

Micropatterned substrates are often used to standardize cell experiments and to quantitatively study the relation between cell shape and function. Moreover, they are increasingly used in combination with traction force microscopy on soft…

Cell Behavior · Quantitative Biology 2015-06-19 Philipp J. Albert , Ulrich S. Schwarz

Epithelial cells can assemble into cohesive colonies and collectively interact with substrates by generating extracellular forces through focal adhesions. Recently, a molecularly based thermodynamic model, which integrates both the…

Soft Condensed Matter · Physics 2023-05-09 Tiankai Zhao , Hongyan Yuan

A severe application of stress on articular cartilage can initiate a cascade of biochemical reactions that can lead to the development of osteoarthritis. We constructed a multiscale mathematical model of the process with three components:…

Tissues and Organs · Quantitative Biology 2023-02-14 Georgi I. Kapitanov , Xiayi Wang , Bruce P. Ayati , Marc J. Brouillette , James A. Martin

Two-dimensional ensembles of bent-core shaped molecules attain at highly orienting surfaces liquid crystalline structures characteristic mostly for lamellar chiral or nonchiral antiferroelectric order. Here, using the Onsager-type of…

Soft Condensed Matter · Physics 2016-06-13 Paweł Karbowniczek , Michał Cieśla , Lech Longa , Agnieszka Chrzanowska

Morphogenetic dynamics of tissue sheets require coordinated cell shape changes regulated by global patterning of mechanical forces. Inspired by such biological phenomena, we propose a minimal mechanochemical model based on the notion that…

Soft Condensed Matter · Physics 2021-01-01 Andrei Zakharov , Kinjal Dasbiswas

The surface a thin-film is attached to and the surrounding monolayer causes geometrical confinement of a interrogated molecule; we look at the base case of a SC$_{18}H_{37}$ in a SC$_{18}H_{37}$ monolayer on Au[111]. Normal mode analysis…

Chemical Physics · Physics 2017-06-29 Ella M Gale

The mechanical problem discussed in this paper focuses on the stress state estimation in a composite laminate in the vicinity of a free edge or microcracks. To calculate these stresses, we use two models called Multiparticle Models of…

Classical Physics · Physics 2009-07-07 Rui Pedro Carreira , Jean-François Caron , Alberto Diaz Diaz

The vertex model of epithelia describes the apical surface of a tissue as a tiling of polygonal cells, with a mechanical energy governed by deviations in cell shape from preferred, or target, area, $A_0$, and perimeter, $P_0$. The model…

Soft Condensed Matter · Physics 2023-04-12 Michael F. Staddon , Arthur Hernandez , Mark J. Bowick , Michael Moshe , M. Cristina Marchetti

Biopolymer Networks play an important role in coordinating and regulating collective cellular dynamics via a number of signaling pathways. Here, we investigate the mechanical response of a model biopolymer network due to the active…

Soft Condensed Matter · Physics 2016-11-23 Long Liang , Christopher Jones , Bo Sun , Yang Jiao

In biological tissues, it is now well-understood that mechanical cues are a powerful mechanism for pattern regulation. While much work has focused on interactions between cells and external substrates, recent experiments suggest that cell…

Soft Condensed Matter · Physics 2017-11-01 Michael Czajkowski , Dapeng Bi , M. Lisa Manning , M. Cristina Marchetti

Morphogenesis, tissue regeneration and cancer invasion involve transitions in tissue morphology. These transitions, caused by collective cell migration (CCM), have been interpreted as active wetting/de-wetting transitions. This phenomenon…

Cell Behavior · Quantitative Biology 2022-08-29 Ivana Pajic-Lijakovic , Milan Milivojevic

Within developing embryos, tissues flow and reorganize dramatically on timescales as short as minutes. This includes epithelial tissues, which often narrow and elongate in convergent extension movements due to anisotropies in external…

Tissues and Organs · Quantitative Biology 2020-06-24 Xun Wang , Matthias Merkel , Leo B. Sutter , Gonca Erdemci-Tandogan , M. Lisa Manning , Karen E. Kasza

During quasi-static dynamics of granular systems, the stress and structure self-organise, but there is currently no quantitative measure or understanding of this phenomenon. Such an understanding is essential because local structural…

Soft Condensed Matter · Physics 2024-10-29 Xiaoyu Jiang , Raphael Blumenfeld , Takashi Matsushima