Related papers: Asymptotically Optimal Amplifiers for the Moran Pr…
An efficient implicit representation of an $n$-vertex graph $G$ in a family $\mathcal{F}$ of graphs assigns to each vertex of $G$ a binary code of length $O(\log n)$ so that the adjacency between every pair of vertices can be determined…
Given data drawn from an unknown distribution, $D$, to what extent is it possible to ``amplify'' this dataset and output an even larger set of samples that appear to have been drawn from $D$? We formalize this question as follows: an…
In this study we investigate vortex structures which lead to the maximum possible growth of palinstrophy in two-dimensional incompressible flows on a periodic domain. The issue of palinstrophy growth is related to a broader research program…
We analyze evolutionary dynamics in a confluent, branching cellular population, such as in a growing duct, vasculature, or in a branching microbial colony. We focus on the coarse-grained features of the evolution and build a statistical…
We show here that the problem of maximizing a family of quantitative functions, encompassing both the modularity (Q-measure) and modularity density (D-measure), for community detection can be uniformly understood as a combinatoric…
Predicting evolution of expanding populations is critical to control biological threats such as invasive species and cancer metastasis. Expansion is primarily driven by reproduction and dispersal, but nature abounds with examples of…
We consider the problem of upper bounding the expected log-likelihood sub-optimality of the maximum likelihood estimate (MLE), or a conjugate maximum a posteriori (MAP) for an exponential family, in a non-asymptotic way. Surprisingly, we…
The concept of a $1$-rotational factorization of a complete graph under a finite group $G$ was studied in detail by Buratti and Rinaldi. They found that if $G$ admits a $1$-rotational $2$-factorization, then the involutions of $G$ are…
In this paper we consider the two-type Moran model with $N$ individuals. Each individual is assigned a resampling rate, drawn independently from a probability distribution ${\mathbb P}$ on ${\mathbb R}_+$, and a type, either $1$ or $0$.…
Computing the rate of evolution in spatially structured populations is difficult. A key quantity is the fixation time of a single mutant with relative reproduction rate $r$ which invades a population of residents. We say that the fixation…
We study the common ancestor type distribution in a $2$-type Moran model with population size $N$, mutation and selection, and in the deterministic limit regime arising in the former when $N$ tends to infinity, without any rescaling of…
The Moran model with recombination is considered, which describes the evolution of the genetic composition of a population under recombination and resampling. There are $n$ sites (or loci), a finite number of letters (or alleles) at every…
We consider the classical problem of learning, with arbitrary accuracy, the natural parameters of a $k$-parameter truncated \textit{minimal} exponential family from i.i.d. samples in a computationally and statistically efficient manner. We…
It has been shown by Indyk and Sidiropoulos [IS07] that any graph of genus g>0 can be stochastically embedded into a distribution over planar graphs with distortion 2^O(g). This bound was later improved to O(g^2) by Borradaile, Lee and…
We consider the Moran model in continuous time with two types, mutation, and selection. We concentrate on the ancestral line and its stationary type distribution. Building on work by Fearnhead (J. Appl. Prob. 39 (2002), 38-54) and Taylor…
For any Borel probability measure on $\mathbb{R}^n$, we may define a family of eccentricity tensors. This new notion, together with a tensorization trick, allows us to prove an energy minimization property for rotationally invariant…
We propose a new method for obtaining complete asymptotic expansions in a systematic manner, which is suitable for counting sequences of various graph families in dense regime. The core idea is to encode the two-dimensional array of…
The population structure often impacts evolutionary dynamics. In constant-selection evolutionary dynamics between two types, amplifiers of selection are networks that promote the fitter mutant to take over the entire population, and…
We consider the case in which mixed graphs (with both directed and undirected edges) are Cayley graphs of Abelian groups. In this case, some Moore bounds were derived for the maximum number of vertices that such graphs can attain. We first…
In this paper, we propose a deterministic algorithm that approximates the optimal path cover on weighted undirected graphs. Based on the 1/2-Approximation Path Cover Algorithm by Moran et al., we add a procedure to remove the redundant…