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We consider the inference of the structure of an undirected graphical model in an exact Bayesian framework. More specifically we aim at achieving the inference with close-form posteriors, avoiding any sampling step. This task would be…

Machine Learning · Statistics 2017-05-02 Loïc Schwaller , Stéphane Robin , Michael Stumpf

Large unweighted directed graphs are commonly used to capture relations between entities. A fundamental problem in the analysis of such networks is to properly define the similarity or dissimilarity between any two vertices. Despite the…

Machine Learning · Statistics 2015-11-03 Tatsunori B. Hashimoto , Yi Sun , Tommi S. Jaakkola

We exploit a decomposition of graph traversals to give a novel characterization of depth-first and breadth-first traversals as universal constructions. Specifically, we introduce functors from two different categories of edge-ordered…

Category Theory · Mathematics 2021-05-03 Siddharth Bhaskar , Robin Kaarsgaard

Given the set of paths through a digraph, the result of uniformly deleting some vertices and identifying others along each path is coherent in such a way as to yield the set of paths through another digraph, called a \emph{path abstraction}…

Combinatorics · Mathematics 2017-01-27 Steve Huntsman

It has been an open problem to find the Moore-Penrose inverses of the incidence, Laplacian, and signless Laplacian matrices of families of graphs except trees and unicyclic graphs. Since the inverse formulas for an odd unicyclic graph and…

Combinatorics · Mathematics 2022-01-12 Jerad Ipsen , Sudipta Mallik

This paper considers the problem of embedding directed graphs in Euclidean space while retaining directional information. We model a directed graph as a finite set of observations from a diffusion on a manifold endowed with a vector field.…

Machine Learning · Statistics 2014-06-03 Dominique Perrault-Joncas , Marina Meila

Let $G$ be a simple undirected $n$-vertex graph with the characteristic polynomial of its Laplacian matrix $L(G)$, $\det (\lambda I - L (G))=\sum_{k = 0}^n (-1)^k c_k \lambda^{n - k}$. Laplacian--like energy of a graph is newly proposed…

Classical Analysis and ODEs · Mathematics 2011-03-25 Aleksandar Ilic , Djordje Krtinic , Milovan Ilic

Specify a randomized algorithm that, given a very large graph or network, extracts a random subgraph. What can we learn about the input graph from a single subsample? We derive laws of large numbers for the sampler output, by relating…

Statistics Theory · Mathematics 2017-10-13 Peter Orbanz

Recent research has tried to extend the concept of renormalization, which is naturally defined for geometric objects, to more general networks with arbitrary topology. The current attempts do not naturally apply to directed networks, for…

Physics and Society · Physics 2024-03-04 Margherita Lalli , Diego Garlaschelli

We consider an inverse problem in information diffusion modeled by random walks on combinatorial graphs. The problem concerns reconstruction of vertex centrality from the distribution of the first passage times observed on a subset of…

Mathematical Physics · Physics 2026-03-24 Yixian Gao , Songshuo Li , Yang Yang

Inspired by the notion of action convergence in graph limit theory, we introduce a measure-theoretic representation of matrices, and we use it to define a new notion of pseudo-metric on the space of matrices. Moreover, we show that such…

Combinatorics · Mathematics 2023-01-05 Raffaella Mulas , Giulio Zucal

We introduce the notion of recurrence and transience for graphs over non-Archimedean ordered field. To do so we relate these graphs to random walks of directed graphs over the reals. In particular, we give a characterization of the real…

Combinatorics · Mathematics 2024-06-26 Matthias Keller , Anna Muranova

We consider the problem of inferring the unobserved edges of a graph from data supported on its nodes. In line with existing approaches, we propose a convex program for recovering a graph Laplacian that is approximately diagonalizable by a…

Signal Processing · Electrical Eng. & Systems 2020-10-16 T. Mitchell Roddenberry , Madeline Navarro , Santiago Segarra

We analyze how the transient dynamics of large dynamical systems in the vicinity of a stationary point, modeled by a set of randomly coupled linear differential equations, depends on the network topology. We characterize the transient…

Adaptation and Self-Organizing Systems · Physics 2024-01-17 Wojciech Tarnowski , Izaak Neri , Pierpaolo Vivo

We introduce a natural notion of mean (or average) distance in the context of compact metric graphs, and study its relation to geometric properties of the graph. We show that it exhibits a striking number of parallels to the reciprocal of…

Combinatorics · Mathematics 2024-02-01 Luís N. Baptista , James B. Kennedy , Delio Mugnolo

A natural representation of random graphs is the random measure. The collection of product random measures, their transformations, and non-negative test functions forms a general representation of the collection of non-negative weighted…

Probability · Mathematics 2022-04-21 Caleb Bastian , Herschel Rabitz

Undirected graphs can be used to describe matrix variate distributions. In this paper, we develop new methods for estimating the graphical structures and underlying parameters, namely, the row and column covariance and inverse covariance…

Machine Learning · Statistics 2014-05-26 Shuheng Zhou

We theoretically study absorption by an undoped graphene layer decorated with arrays of small particles. We discuss periodic and random arrays within a common formalism, which predicts a maximum absorption of $50\%$ for suspended graphene…

Mesoscale and Nanoscale Physics · Physics 2014-02-24 T. Stauber , G. Gómez-Santos , F. Javier García de Abajo

With the recent success of deep neural networks in computer vision, it is important to understand the internal working of these networks. What does a given neuron represent? The concepts captured by a neuron may be hard to understand or…

Computer Vision and Pattern Recognition · Computer Science 2020-12-29 Suryabhan Singh Hada , Miguel Á. Carreira-Perpiñán

In this work we investigate the relationship among three classical sampling techniques: the inverse of density (Khintchine's theorem), the transformed rejection (TR) and the generalized ratio of uniforms (GRoU). Given a monotonic…

Computation · Statistics 2015-03-20 Luca Martino , David Luengo , Joaquín Míguez