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Real-world data typically contain repeated and periodic patterns. This suggests that they can be effectively represented and compressed using only a few coefficients of an appropriate basis (e.g., Fourier, Wavelets, etc.). However, distance…

Machine Learning · Statistics 2014-05-26 Michail Vlachos , Nikolaos Freris , Anastasios Kyrillidis

We present a structure in external memory for "top-k range reporting", which uses linear space, answers a query in O(lg_B n + k/B) I/Os, and supports an update in O(lg_B n) amortized I/Os, where n is the input size, and B is the block size.…

Data Structures and Algorithms · Computer Science 2014-03-27 Yufei Tao

Dynamic tree data structures maintain a forest while supporting insertion and deletion of edges and a broad set of queries in $O(\log n)$ time per operation. Such data structures are at the core of many modern algorithms. Recent work has…

Data Structures and Algorithms · Computer Science 2025-06-23 Humza Ikram , Andrew Brady , Daniel Anderson , Guy Blelloch

We revisit the fundamental problem of dictionary look-up with mismatches. Given a set (dictionary) of $d$ strings of length $m$ and an integer $k$, we must preprocess it into a data structure to answer the following queries: Given a query…

Data Structures and Algorithms · Computer Science 2018-06-27 Paweł Gawrychowski , Gad M. Landau , Tatiana Starikovskaya

Minimizers sampling is one of the most widely-used mechanisms for sampling strings. Let $S=S[0]\ldots S[n-1]$ be a string over an alphabet $\Sigma$. In addition, let $w\geq 2$ and $k\geq 1$ be two integers and $\rho=(\Sigma^k,\leq)$ be a…

Data Structures and Algorithms · Computer Science 2025-02-25 Wiktor Zuba , Oded Lachish , Solon P. Pissis

We introduce a dynamic data structure for the compact representation of binary relations $\mathcal{R} \subseteq A \times B$. The data structure is a dynamic variant of the k$^2$-tree, a static compact representation that takes advantage of…

Data Structures and Algorithms · Computer Science 2017-07-11 Nieves R. Brisaboa , Ana Cerdeira-Pena , Guillermo de Bernardo , Gonzalo Navarro

In this paper, we construct a data structure to efficiently compute the longest increasing subsequence of a sequence subject to dynamic updates. Our data structure supports a query for the longest increasing subsequence in $O(r+\log n)$…

Data Structures and Algorithms · Computer Science 2013-12-17 Alex Chen , Timothy Chu , Nathan Pinsker

The Suffix Array SA(S) of a string S[1 ... n] is an array containing all the suffixes of S sorted by lexicographic order. The suffix array is one of the most well known indexing data structures, and it functions as a key tool in many string…

Data Structures and Algorithms · Computer Science 2020-07-15 Amihood Amir , Itai Boneh

The longest common substring problem consists in finding a longest string that appears as a (contiguous) substring of two input strings. We consider the dynamic variant of this problem, in which we are to maintain two dynamic strings $S$…

Data Structures and Algorithms · Computer Science 2026-04-09 Panagiotis Charalampopoulos , Paweł Gawrychowski , Karol Pokorski

This paper presents a general technique for optimally transforming any dynamic data structure that operates on atomic and indivisible keys by constant-time comparisons, into a data structure that handles unbounded-length keys whose…

Data Structures and Algorithms · Computer Science 2013-06-04 Amihood Amir , Gianni Franceschini , Roberto Grossi , Tsvi Kopelowitz , Moshe Lewenstein , Noa Lewenstein

We study data structures in the presence of adversarial noise. We want to encode a given object in a succinct data structure that enables us to efficiently answer specific queries about the object, even if the data structure has been…

Data Structures and Algorithms · Computer Science 2008-12-01 Ronald de Wolf

We describe a data structure that stores a string $S$ in space similar to that of its Lempel-Ziv encoding and efficiently supports access, rank and select queries. These queries are fundamental for implementing succinct and compressed data…

Data Structures and Algorithms · Computer Science 2014-12-03 Djamal Belazzougui , Travis Gagie , Paweł Gawrychowski , Juha Kärkkäinen , Alberto Ordóñez , Simon J. Puglisi , Yasuo Tabei

In the recent research of data mining, frequent structures in a sequence of graphs have been studied intensively, and one of the main concern is changing structures along a sequence of graphs that can capture dynamic properties of data. On…

Data Structures and Algorithms · Computer Science 2012-06-28 Takeaki Uno , Yushi Uno

The problem of compressive detection of random subspace signals is studied. We consider signals modeled as $\mathbf{s} = \mathbf{H} \mathbf{x}$ where $\mathbf{H}$ is an $N \times K$ matrix with $K \le N$ and $\mathbf{x} \sim…

Information Theory · Computer Science 2016-05-06 Alireza Razavi , Mikko Valkama , Danijela Cabric

It is shown that for a given ordered node-labelled tree of size $n$ and with $s$ many different node labels, one can construct in linear time a top dag of height $O(\log n)$ and size $O(n / \log_\sigma n) \cap O(d \cdot \log n)$, where…

Data Structures and Algorithms · Computer Science 2017-12-19 Markus Lohrey , Carl Philipp Reh , Kurt Sieber

We consider preprocessing a set $S$ of $n$ points in convex position in the plane into a data structure supporting queries of the following form: given a point $q$ and a directed line $\ell$ in the plane, report the point of $S$ that is…

Computational Geometry · Computer Science 2017-10-16 Boris Aronov , Prosenjit Bose , Erik D. Demaine , Joachim Gudmundsson , John Iacono , Stefan Langerman , Michiel Smid

In this paper we study two geometric data structure problems in the special case when input objects or queries are fat rectangles. We show that in this case a significant improvement compared to the general case can be achieved. We describe…

Data Structures and Algorithms · Computer Science 2019-05-08 Timothy M. Chan , Yakov Nekrich , Michiel Smid

Rank/Select dictionaries are data structures for an ordered set $S \subset \{0,1,...,n-1\}$ to compute $\rank(x,S)$ (the number of elements in $S$ which are no greater than $x$), and $\select(i,S)$ (the $i$-th smallest element in $S$),…

Data Structures and Algorithms · Computer Science 2007-05-23 Daisuke Okanohara , Kunihiko Sadakane

We show that a large fraction of the data-structure lower bounds known today in fact follow by reduction from the communication complexity of lopsided (asymmetric) set disjointness. This includes lower bounds for: * high-dimensional…

Data Structures and Algorithms · Computer Science 2010-10-20 Mihai Patrascu

The monotone minimal perfect hash function (MMPHF) problem is the following indexing problem. Given a set $S= \{s_1,\ldots,s_n\}$ of $n$ distinct keys from a universe $U$ of size $u$, create a data structure $DS$ that answers the following…

Data Structures and Algorithms · Computer Science 2022-07-26 Sepehr Assadi , Martin Farach-Colton , William Kuszmaul