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Related papers: Folding kinetics of a polymer [corrigendum]

200 papers

Conformal field theories in curved backgrounds have been used to describe inhomogeneous one-dimensional systems, such as quantum gases in trapping potentials and non-equilibrium spin chains. This approach provided, in a elegant and simple…

Statistical Mechanics · Physics 2019-03-26 Sara Murciano , Paola Ruggiero , Pasquale Calabrese

We use discontinuous molecular dynamics and grand-canonical transition-matrix Monte Carlo simulations to explore how confinement between parallel hard walls modifies the relationships between packing fraction, self-diffusivity, partial…

Soft Condensed Matter · Physics 2009-11-13 Jeetain Mittal , Vincent K. Shen , Jeffrey R. Errington , Thomas M. Truskett

The conformational complexity of linear polymers far exceeds that of point-like atoms and molecules. Polymers can bend, twist, even become knotted. Thus they may also display a much richer phase structure than point particles. But it is not…

Biological Physics · Physics 2015-06-16 Andrey Krokhotin , Stam Nicolis , Antti J. Niemi

We study the unfolding of a single polymer chain due to an external force. We use a simplified model which allows to perform all calculations in closed form without assuming a Boltzmann-Gibbs form for the equilibrium distribution.…

Statistical Mechanics · Physics 2009-11-13 Erik Van der Straeten , Jan Naudts

We utilize a fractional exclusion statistics of Haldane and Wu hypothesis to study the thermodynamics of a unitary Fermi gas trapped in a harmonic oscillator potential at ultra-low finite temperature. The entropy per particle as a function…

Other Condensed Matter · Physics 2010-09-01 Fang Qin , Ji-sheng Chen

By means of multicanonical computer simulations, we investigate thermodynamic properties of the aggregation of interacting semiflexible polymers. We analyze a mesoscopic bead-stick model, where nonbonded monomers interact via Lennard-Jones…

Soft Condensed Matter · Physics 2015-05-28 Christoph Junghans , Michael Bachmann , Wolfhard Janke

Recent advances in single macromolecule experiments have sparked interest in the ensemble dependence of force-extension relations. The thermodynamic limit may not be attainable for such systems, that leads to inequivalence of the…

Soft Condensed Matter · Physics 2018-07-30 Sandipan Dutta , Panayotis Benetatos

We have connected the dynamic fragility, namely the rapidity of the relaxation time increase upon temperature reduction, to the excess entropy and heat capacity of a large number of glass-forming polymers. The connection was obtained in a…

Soft Condensed Matter · Physics 2009-11-11 D. Cangialosi , A. Alegria , J. Colmenero

The physical properties of blends of distinct homopolymers, cross-linked beyond the gelation point, are addressed via a Landau approach involving a pair of coupled order-parameter fields: one describing vulcanisation, the other describing…

Soft Condensed Matter · Physics 2009-11-10 Christian Wald , Annette Zippelius , Paul M. Goldbart

We report grand canonical Monte Carlo simulations of the critical point properties of homopolymers within the Bond Fluctuation model. By employing Configurational Bias Monte Carlo methods, chain lengths of up to N=60 monomers could be…

Condensed Matter · Physics 2009-10-28 N. B. Wilding , M. Mueller , K. Binder

In the first part of this work a summary is provided of some recent experiments and theoretical results which are relevant in the research of systems of polymer rings in nontrivial topological conformations. Next, some advances in modeling…

Soft Condensed Matter · Physics 2014-02-04 Yani Zhao , Franco Ferrari

Frontal polymerization is a promising energy-saving method for rapid fabrication of polymer components with good mechanical properties. In these systems, a small energy input is sufficient to convert monomers, from a liquid or soft solid…

Soft Condensed Matter · Physics 2023-10-04 Xuanhe Li , Tal Cohen

We present the first model-independent comparison of recent measurements of the entropy and of the critical temperature of a unitary Fermi gas, performed by Luo et al., with the most complete results currently available from finite…

Statistical Mechanics · Physics 2008-11-26 Aurel Bulgac , Joaquin E. Drut , Piotr Magierski

We analyze the freezing and collapse transition of a simple model for flexible polymer chains on simple cubic and face-centered cubic lattices by means of sophisticated chain-growth methods. In contrast to bond-fluctuation polymer models in…

Soft Condensed Matter · Physics 2009-02-16 Thomas Vogel , Michael Bachmann , Wolfhard Janke

The generalized entropy theory is applied to assess the joint influence of the microscopic cohesive energy and chain stiffness on glass formation in polymer melts using a minimal model containing a single bending energy and a single…

Soft Condensed Matter · Physics 2015-06-23 Wen-Sheng Xu , Karl F. Freed

We review recent simulation studies of interfaces between immiscible homopolymer phases. Special emphasis is given to the presentation of efficient simulation techniques and powerful methods of data analysis, such as the analysis of…

Soft Condensed Matter · Physics 2016-11-03 M. Mueller , F. Schmid

The effect of different move sets on the folding kinetics of the Monte Carlo simulations is analysed based on the conformation-network and the temperature-dependent folding kinetics. A new scheme of implementing Metropolis algorithm is…

Soft Condensed Matter · Physics 2007-05-23 Yu-Pin Luo , Ming-Chang Huang , Yen-Liang Chou , Tsong-Ming Liaw

We implement a Wang-Landau sampling technique in quantum Monte Carlo (QMC) for the purpose of calculating the Renyi entanglement entropies and associated mutual information. The algorithm converges an estimate for an analogue to the density…

Statistical Mechanics · Physics 2013-01-23 Stephen Inglis , Roger G. Melko

We report Monte Carlo simulations of a lattice-polymer model that can account for both polymer crystallization and liquid-liquid demixing in solutions of semiflexible homopolymers. In our model, neighboring polymer segments can have…

Soft Condensed Matter · Physics 2009-11-07 Wenbing Hu , Daan Frenkel , Vincent B. F. Mathot

Many small proteins fold via a first-order "all-or-none" transition directly from an expanded coil to a compact native state. Here we study an analogous direct freezing transition from an expanded coil to a compact crystallite for a simple…

Soft Condensed Matter · Physics 2010-05-28 Mark P. Taylor , Wolfgang Paul , Kurt Binder