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In complex data analyses it is increasingly important to capture information about the usage of data sets in addition to their preservation over time to ensure reproducibility of results, to verify the work of others and to ensure…

Software Engineering · Computer Science 2018-03-21 Richard McClatchey

The high-performance computing (HPC) community has adopted incentive structures to motivate reproducible research, with major conferences awarding badges to papers that meet reproducibility requirements. Yet, many papers do not meet such…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-09-01 Valérie Hayot-Sasson , Nathaniel Hudson , André Bauer , Maxime Gonthier , Ian Foster , Kyle Chard

Benchmarking, which involves collecting reference datasets and demonstrating method performances, is a requirement for the development of new computational tools, but also becomes a domain of its own to achieve neutral comparisons of…

Other Quantitative Biology · Quantitative Biology 2025-07-24 Izaskun Mallona , Charlotte Soneson , Ben Carrillo , Almut Luetge , Daniel Incicau , Reto Gerber , Anthony Sonrel , Mark D. Robinson

Understanding the behavior of software in execution is a key step in identifying and fixing performance issues. This is especially important in high performance computing contexts where even minor performance tweaks can translate into large…

Scientific software is one of the key elements for reproducible research. However, classic publications and related scientific software are typically not (sufficiently) linked, and it lacks tools to jointly explore these artefacts. In this…

Digital Libraries · Computer Science 2018-06-21 Anett Hoppe , Jascha Hagen , Helge Holzmann , Günter Kniesel , Ralph Ewerth

Nowadays, both the amount of cyberattacks and their sophistication have considerably increased, and their prevention is of concern of most of organizations. Cooperation by means of information sharing is a promising strategy to address this…

Cryptography and Security · Computer Science 2016-08-01 Roberto Garrido-Pelaz , Lorena Gozalez-Manzano , Sergio Pastrana

The integration of machine learning techniques in materials discovery has become prominent in materials science research and has been accompanied by an increasing trend towards open-source data and tools to propel the field. Despite the…

Materials Science · Physics 2026-05-27 Daniel Persaud , Logan Ward , Jason Hattrick-Simpers

Over the past few years, deep learning methods have been applied for a wide range of Software Engineering (SE) tasks, including in particular for the important task of automatically predicting and localizing faults in software. With the…

Software Engineering · Computer Science 2024-02-09 Adil Mukhtar , Dietmar Jannach , Franz Wotawa

Researchers frequently need to synthesize their own publications into coherent narratives that demonstrate their scholarly contributions. To suit diverse communication contexts, exploring alternative ways to organize one's work while…

Human-Computer Interaction · Computer Science 2025-07-22 Runhua Zhang , Yang Ouyang , Leixian Shen , Yuying Tang , Xiaojuan Ma , Huamin Qu , Xian Xu

One of the challenges in machine learning research is to ensure that presented and published results are sound and reliable. Reproducibility, that is obtaining similar results as presented in a paper or talk, using the same code and data…

The enabling of scientific experiments that are embarrassingly parallel, long running and data-intensive into a cloud-based execution environment is a desirable, though complex undertaking for many researchers. The management of such…

Developing efficient software and hardware has never been harder whether it is for a tiny IoT device or an Exascale supercomputer. Apart from the ever growing design and optimization complexity, there exist even more fundamental problems…

Human-Computer Interaction · Computer Science 2018-01-25 Grigori Fursin , Anton Lokhmotov , Dmitry Savenko , Eben Upton

The advent of experimental science facilities-instruments and observatories, such as the Large Hadron Collider, the Laser Interferometer Gravitational Wave Observatory, and the upcoming Large Synoptic Survey Telescope-has brought about…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-02-12 E. A. Huerta , Roland Haas , Shantenu Jha , Mark Neubauer , Daniel S. Katz

This paper describes a vision and work in progress to elevate network resources and data transfer management to the same level as compute and storage in the context of services access, scheduling, life cycle management, and orchestration.…

Networking and Internet Architecture · Computer Science 2022-03-22 Tom Lehman , Xi Yang , Chin Guok , Frank Wuerthwein , Igor Sfiligoi , John Graham , Aashay Arora , Dima Mishin , Diego Davila , Jonathan Guiang , Tom Hutton , Harvey Newman , Justas Balcas

Rapid advances in computing technology over the past few decades have spurred two extraordinary phenomena in science: large-scale and high-throughput data collection coupled with the creation and implementation of complex statistical…

Other Statistics · Statistics 2020-07-27 Roger D. Peng , Stephanie C. Hicks

The disconnect between distributed software artifacts and their supposed source code enables attackers to leverage the build process for inserting malicious functionality. Past research in this field focuses on compiled language ecosystems,…

Software Engineering · Computer Science 2025-08-13 Timo Pohl , Pavel Novák , Marc Ohm , Michael Meier

A complete declarative description of the computational environment is often missing when researchers share their materials. Without such description, software obsolescence and missing system components can jeopardize computational…

Computation · Statistics 2023-07-19 Chung-hong Chan , David Schoch

Obtaining a relevant dataset is central to conducting empirical studies in software engineering. However, in the context of mining software repositories, the lack of appropriate tooling for large scale mining tasks hinders the creation of…

Software Engineering · Computer Science 2023-06-21 Romain Lefeuvre , Jessie Galasso , Benoit Combemale , Houari Sahraoui , Stefano Zacchiroli

Modern research heavily relies on software. A significant challenge researchers face is understanding the complex software used in specific research fields. We target two scenarios in this context, namely long onboarding times for newcomers…

Software Engineering · Computer Science 2026-04-14 Adrian Bajraktari , Andreas Vogelsang

The use of approximation is fundamental in computational science. Almost all computational methods adopt approximations in some form in order to obtain a favourable cost/accuracy trade-off and there are usually many approximations that…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-06-14 Michael A. Johnston , Vassilis Vassiliadis
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