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Protected Health Information (PHI) sharing significantly enhances patient care quality and coordination, contributing to more accurate diagnoses, efficient treatment plans, and a comprehensive understanding of patient history. Compliance…

Cryptography and Security · Computer Science 2024-07-04 Md Al Amin , Hemanth Tummala , Rushabh Shah , Indrajit Ray

The presence of detailed clinical information in electronic health record (EHR) systems presents promising prospects for enhancing patient care through automated retrieval techniques. Nevertheless, it is widely acknowledged that accessing…

Information Retrieval · Computer Science 2024-09-13 Abderrahim Oussama Batouche , Eugen Czeizler , Miika Koskinen , Tuomas Mirtti , Antti Sakari Rannikko

Several recent works have proposed and implemented cryptography as a means to preserve privacy and security of patients health data. Nevertheless, the weakest point of electronic health record (EHR) systems that relied on these…

Computers and Society · Computer Science 2017-08-09 Adebayo Omotosho , Justice Emuoyibofarhe , Christoph Meinel

The rise of chronic diseases and pandemics like COVID-19 has emphasized the need for effective patient data processing while ensuring privacy through anonymization and de-identification of protected health information (PHI). Anonymized data…

Computation and Language · Computer Science 2024-12-17 Murat Gunay , Bunyamin Keles , Raife Hizlan

Electronic Health Records (EHRs) are rich sources of patient-level data, offering valuable resources for medical data analysis. However, privacy concerns often restrict access to EHRs, hindering downstream analysis. Current EHR…

Machine Learning · Computer Science 2024-12-03 Muhang Tian , Bernie Chen , Allan Guo , Shiyi Jiang , Anru R. Zhang

The increasing availability of sensitive textual data has created an urgent need for robust de-identification methods that enable compliant data sharing while preserving downstream utility. This paper presents DeID-Clinic, a multi-layered…

Computation and Language · Computer Science 2026-05-26 Angel Paul , Dhivin Shaji , Lifeng Han , Warren Del-Pinto , Goran Nenadic , Suzan Verberne

Mining health data can lead to faster medical decisions, improvement in the quality of treatment, disease prevention, reduced cost, and it drives innovative solutions within the healthcare sector. However, health data is highly sensitive…

Cryptography and Security · Computer Science 2022-04-28 Iyiola E. Olatunji , Jens Rauch , Matthias Katzensteiner , Megha Khosla

De-identification in the healthcare setting is an application of NLP where automated algorithms are used to remove personally identifying information of patients (and, sometimes, providers). With the recent rise of generative large language…

Computation and Language · Computer Science 2025-09-19 Kiana Aghakasiri , Noopur Zambare , JoAnn Thai , Carrie Ye , Mayur Mehta , J. Ross Mitchell , Mohamed Abdalla

Feature engineering remains a major bottleneck when creating predictive systems from electronic medical records. At present, an important missing element is detecting predictive regular clinical motifs from irregular episodic records. We…

Machine Learning · Statistics 2016-07-27 Phuoc Nguyen , Truyen Tran , Nilmini Wickramasinghe , Svetha Venkatesh

In this paper, we study the privacy of online health data. We present a novel online health data De-Anonymization (DA) framework, named De-Health. De-Health consists of two phases: Top-K DA, which identifies a candidate set for each…

Cryptography and Security · Computer Science 2019-06-04 Shouling Ji , Qinchen Gu , Haiqin Weng , Qianjun Liu , Qinming He , Raheem Beyah , Ting Wang

Deep learning models have demonstrated superior performance in various healthcare applications. However, the major limitation of these deep models is usually the lack of high-quality training data due to the private and sensitive nature of…

Computation and Language · Computer Science 2022-11-15 Qiuhao Lu , Dejing Dou , Thien Huu Nguyen

De-identification is the task of detecting privacy-related entities in text, such as person names, emails and contact data. It has been well-studied within the medical domain. The need for de-identification technology is increasing, as…

Computation and Language · Computer Science 2021-05-25 Kristian Nørgaard Jensen , Mike Zhang , Barbara Plank

This article reviews recent advances in applying natural language processing (NLP) to Electronic Health Records (EHRs) for computational phenotyping. NLP-based computational phenotyping has numerous applications including diagnosis…

Computation and Language · Computer Science 2018-06-18 Zexian Zeng , Yu Deng , Xiaoyu Li , Tristan Naumann , Yuan Luo

In the past decade, with the development of big data technology, an increasing amount of patient information has been stored as electronic health records (EHRs). Leveraging these data, various doctor recommendation systems have been…

Information Retrieval · Computer Science 2022-07-14 Luning Bi , Yunlong Wang , Fan Zhang , Zhuqing Liu , Yong Cai , Emily Zhao

Post-market medical device surveillance is a challenge facing manufacturers, regulatory agencies, and health care providers. Electronic health records are valuable sources of real world evidence to assess device safety and track…

Computers and Society · Computer Science 2019-04-17 Alison Callahan , Jason A Fries , Christopher Ré , James I Huddleston , Nicholas J Giori , Scott Delp , Nigam H Shah

Objective: To comparatively evaluate several transformer model architectures at identifying protected health information (PHI) in the i2b2/UTHealth 2014 clinical text de-identification challenge corpus. Methods: The i2b2/UTHealth 2014…

Computation and Language · Computer Science 2022-04-15 Christopher Meaney , Wali Hakimpour , Sumeet Kalia , Rahim Moineddin

Doctors often make diagonostic decisions based on patient's image scans, such as magnetic resonance imaging (MRI), and patient's electronic health records (EHR) such as age, gender, blood pressure and so on. Despite a lot of automatic…

Computer Vision and Pattern Recognition · Computer Science 2021-12-23 Cheng Jiang , Yihao Chen , Jianbo Chang , Ming Feng , Renzhi Wang , Jianhua Yao

Electronic Health Records (EHRs) are pivotal in clinical practices, yet their retrieval remains a challenge mainly due to semantic gap issues. Recent advancements in dense retrieval offer promising solutions but existing models, both…

Information Retrieval · Computer Science 2025-07-25 Zhengyun Zhao , Huaiyuan Ying , Yue Zhong , Sheng Yu

Hospitals lack automated systems to harness the growing volume of heterogeneous clinical and operational data to effectively forecast critical events. Early identification of patients at risk for deterioration is essential not only for…

Medical health records and clinical summaries contain a vast amount of important information in textual form that can help advancing research on treatments, drugs and public health. However, the majority of these information is not shared…

Computation and Language · Computer Science 2020-10-13 Nikola Milosevic , Gangamma Kalappa , Hesam Dadafarin , Mahmoud Azimaee , Goran Nenadic
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