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We study a crystal growth Markov model proposed by Gates and Westcott (\cite{Kinetics1}, \cite{Kinetics2}). This is an aggregation process where particles are packed in a square lattice accordingly to prescribed deposition rates. This model…

Probability · Mathematics 2012-11-07 François Ezanno

The recently proposed generative flow networks (GFlowNets) are a method of training a policy to sample compositional discrete objects with probabilities proportional to a given reward via a sequence of actions. GFlowNets exploit the…

Machine Learning · Computer Science 2024-02-27 Daniil Tiapkin , Nikita Morozov , Alexey Naumov , Dmitry Vetrov

A phase-field approach describing the dynamics of a strained solid in contact with its melt is developed. By rigorous asymptotic analysis we show that the sharp-interface limit of this model recovers the continuum model equations for the…

Statistical Mechanics · Physics 2007-05-23 Klaus Kassner , Chaouqi Misbah , Judith Mueller , Jens Kappey , Peter Kohlert

Inertial particles advected in chaotic flows often accumulate in strange attractors. While moving in these fractal sets they usually approach each other and collide. Here we consider inertial particles aggregating upon collision. The new…

Fluid Dynamics · Physics 2009-11-13 Jens C. Zahnow , Rafael D. Vilela , Ulrike Feudel , Tamas Tel

A general framework to describe a vast majority of biology-inspired systems is to model them as stochastic processes in which multiple couplings are in play at the same time. Molecular motors, chemical reaction networks, catalytic enzymes,…

Statistical Mechanics · Physics 2020-11-25 Daniel M. Busiello , Deepak Gupta , Amos Maritan

In this paper, we propose Continuous Graph Flow, a generative continuous flow based method that aims to model complex distributions of graph-structured data. Once learned, the model can be applied to an arbitrary graph, defining a…

Machine Learning · Computer Science 2019-10-01 Zhiwei Deng , Megha Nawhal , Lili Meng , Greg Mori

In a previous work we devised a framework to derive generalised gradient systems for an evolution equation from the large deviations of an underlying microscopic system, in the spirit of the Onsager-Machlup relations. Of particular interest…

Mathematical Physics · Physics 2018-06-28 D. R. Michiel Renger

In this article we propose a unified framework in order to study reaction-diffusion systems containing self- and cross-diffusion using a free energy approach. This framework naturally leads to the formulation of an energy law, and to a…

Computational Physics · Physics 2021-10-12 Benjamin Aymard

Spin-glasses are universal models that can capture complex behavior of many-body systems at the interface of statistical physics and computer science including discrete optimization, inference in graphical models, and automated reasoning.…

Machine Learning · Computer Science 2020-01-14 Gavin S. Hartnett , Masoud Mohseni

The generator coordinate method of a microscopic cluster model is developed to treat the resonance and scattering of nuclear clusters with complex scaling. We consistently derive the formulation of the complex scaling for the microscopic…

Nuclear Theory · Physics 2023-06-19 Takayuki Myo , Hiroki Takemoto

In the recent years we have seen a lot of activity around systems and experiments, like DIS at HERA or the heavy-ion experiments at RHIC, involving a large number of partons due to the high enery and/or the high number of participants of…

High Energy Physics - Phenomenology · Physics 2010-11-30 Elena G. Ferreiro

Loosely speaking, the Shannon entropy rate is used to gauge a stochastic process' intrinsic randomness; the statistical complexity gives the cost of predicting the process. We calculate, for the first time, the entropy rate and statistical…

Statistical Mechanics · Physics 2017-09-13 S. E. Marzen , J. P. Crutchfield

Complex systems are typically characterized as an intermediate situation between a complete regular structure and a random system. Brain signals can be studied as a striking example of such systems: cortical states can range from highly…

Discrete-element simulations are used to monitor several micro-scale characteristics within a granular material, demonstrating their convergence during loading toward the critical state, their stationarity at the critical state, and the…

Soft Condensed Matter · Physics 2018-12-20 Matthew R. Kuhn

A run-and-tumble particle in a one dimensional box (infinite potential well) is studied. The steady state is analytically solved and analyzed, revealing the emergent length scale of the boundary layer where particles accumulate near the…

Statistical Mechanics · Physics 2020-10-07 Nitzan Razin

A computer model is described which is used to assess the dynamical complexity of a class of networks of spiking neurons with small-world properties. Networks are constructed by forming an initially segregated set of highly intra-connected…

Biological Physics · Physics 2009-11-13 Murray Shanahan

Graph generative models are essential across diverse scientific domains by capturing complex distributions over relational data. Among them, graph diffusion models achieve superior performance but face inefficient sampling and limited…

Machine Learning · Computer Science 2025-06-17 Yiming Qin , Manuel Madeira , Dorina Thanou , Pascal Frossard

The incorporation of particle inertia into the usual mean field theory for particle aggregation and fragmentation in fluid flows is still an unsolved problem. We therefore suggest an alternative approach that is based on the dynamics of…

Fluid Dynamics · Physics 2011-03-08 Jens C. Zahnow , Joeran Maerz , Ulrike Feudel

The stochastic entropy generated during the evolution of a system interacting with an environment may be separated into three components, but only two of these have a non-negative mean. The third component of entropy production is…

Statistical Mechanics · Physics 2013-05-30 Ian J. Ford , Richard E. Spinney

A complex system with many interacting individuals can be represented by a network consisting of nodes and links representing individuals and pairwise interactions, respectively. However, real-world systems grow with time and include many…

Physics and Society · Physics 2024-11-12 Soo Min Oh , Yongsun Lee , Byungnam Kahng