Related papers: Effective bi-immunity and randomness
In this paper, we study the estimation of the effective number of relativistic species from a combination of CMB and BAO data. We vary different ingredients of the analysis: the Planck high-$\ell$ likelihoods, the Boltzmann solvers, and the…
We investigate which infinite binary sequences (reals) are effectively random with respect to some continuous (i.e., non-atomic) probability measure. We prove that for every n, all but countably many reals are n-random for such a measure,…
An infinite binary sequence A is absolutely undecidable if it is impossible to compute A on a set of positions of positive upper density. Absolute undecidability is a weakening of bi-immunity. Downey, Jockusch and Schupp asked whether,…
We consider ensembles of random matrices, known as biorthogonal ensembles, whose eigenvalue probability density function can be written as a product of two determinants. These systems are closely related to multiple orthogonal functions. It…
In this paper, we study two-dimensional, three-dimensional monotonic and nonmonotonic immune responses in viral infection systems. Our results show that the viral infection systems with monotonic immune response has no bistability appear.…
Mendelian randomization (MR) has been a popular method in genetic epidemiology to estimate the effect of an exposure on an outcome using genetic variants as instrumental variables (IV), with two-sample summary-data MR being the most…
We introduce a novel, multi-scale model for affinity maturation, which aims to capture the intra-clonal, inter-clonal and epitope-specific organization of the B cell population in a germinal center. We describe the evolution of the B cell…
This article addresses the problem of testing the conditional independence of two generic random vectors $X$ and $Y$ given a third random vector $Z$, which plays an important role in statistical and machine learning applications. We propose…
Language models famously improve under a smooth scaling law, but some specific capabilities exhibit sudden breakthroughs in performance. Advocates of "emergence" view these capabilities as unlocked at a specific scale, but others attribute…
The integration of artificial intelligence into clinical workflows requires reliable and robust models. Repeatability is a key attribute of model robustness. Repeatable models output predictions with low variation during independent tests…
Cardinality potentials are a generally useful class of high order potential that affect probabilities based on how many of D binary variables are active. Maximum a posteriori (MAP) inference for cardinality potential models is…
We contribute to micro-data model-based reinforcement learning (MBRL) by rigorously comparing popular generative models using a fixed (random shooting) control agent. We find that on an environment that requires multimodal posterior…
B cell receptors (BCRs) play a crucial role in recognizing and fighting foreign antigens. High-throughput sequencing enables in-depth sampling of the BCRs repertoire after immunization. However, only a minor fraction of BCRs actively…
Composite likelihoods are a class of alternatives to the full likelihood which are widely used in many situations in which the likelihood itself is intractable. A composite likelihood may be computed without the need to specify the full…
The order and disorder of binary representations of the natural numbers < 2^8 is measured using the BiEntropy function. Significant differences are detected between the primes and the non primes. The BiEntropic prime density is shown to be…
Diverse T and B cell repertoires play an important role in mounting effective immune responses against a wide range of pathogens and malignant cells. The number of unique T and B cell clones is characterized by T and B cell receptors (TCRs…
We investigate enumerability properties for classes of sets which permit recursive, lexicographically increasing approximations, or left-r.e. sets. In addition to pinpointing the complexity of left-r.e. Martin-L\"{o}f, computably, Schnorr,…
We describe a new class of Boolean functions which provide the presently best known trade-off between low computational complexity, nonlinearity and (fast) algebraic immunity. In particular, for $n\leq 20$, we show that there are functions…
A random dense countable set is characterized (in distribution) by independence and stationarity. Two examples are `Brownian local minima' and `unordered infinite sample'. They are identically distributed. A framework for such concepts,…
We investigate the multiplicity model with m values of some test statistic independently drawn from a mixture of no effect (null) and positive effect (alternative), where we seek to identify, the alternative test results with a controlled…