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Dynamical reaction-diffusion processes and meta-population models are standard modeling approaches for a wide variety of phenomena in which local quantities - such as density, potential and particles - diffuse and interact according to the…

Statistical Mechanics · Physics 2007-05-23 V. Colizza , R. Pastor-Satorras , A. Vespignani

Decisions to disperse from a habitat stand out among organismal behaviors as pivotal drivers of ecosystem dynamics across scales. Encounters with other species are an important component of adaptive decision-making in dispersal, resulting…

Populations and Evolution · Quantitative Biology 2024-03-21 Patrick Lawton , Ashkaan K. Fahimipour , Kurt E. Anderson

Networks are a widely used and efficient paradigm to model real-world systems where basic units interact pairwise. Many body interactions are often at play, and cannot be modelled by resorting to binary exchanges. In this work, we consider…

Adaptation and Self-Organizing Systems · Physics 2020-06-03 Timoteo Carletti , Duccio Fanelli , Sara Nicoletti

We develop a novel approach to study the global behaviour of large foodwebs for ecosystems where several species share multiple resources. The model extends and generalize some previous works and takes into account self-limitation. Under…

Dynamical Systems · Mathematics 2019-03-12 Vladimir Kozlov , Vladimir G. Tkachev , Sergey Vakulenko , Uno Wennergren

Bacteria can form a great variety of spatially heterogeneous cell density patterns, ranging from simple concentric rings to dynamical spiral waves appearing in growing colonies. These pattern formation phenomena are important as they…

Populations and Evolution · Quantitative Biology 2025-01-17 John S. Chuang , Riccardo Rao , Stanislas Leibler

The theory of complex networks and of disordered systems is used to study the stability and dynamical properties of a simple model of material flow networks defined on random graphs. In particular we address instabilities that are…

Disordered Systems and Neural Networks · Physics 2009-11-13 Kartik Anand , Tobias Galla

Climate change is reshaping species interactions and movement across fragmented landscapes. Despite this, most mathematical models assume random diffusion, overlooking the influence of directed movement. Here, we develop a graph based…

Dynamical Systems · Mathematics 2026-04-08 Pranali Roy Chowdhury , Soumyendu Raha

Diffusion dynamics in multiplex networks can model a diverse number of real-world processes. In some specific configurations of these systems, the super-diffusion phenomenon arises, in which the diffusion is faster in the multiplex network…

Physics and Society · Physics 2024-12-05 Lluís Torres-Hugas , Jordi Duch , Sergio Gómez

Dynamic multilayer networks frequently represent the structure of multiple co-evolving relations; however, statistical models are not well-developed for this prevalent network type. Here, we propose a new latent space model for dynamic…

Methodology · Statistics 2021-03-25 Joshua Daniel Loyal , Yuguo Chen

We explore a simplified class of models we call swarms, which are inspired by the collective behavior of social insects. We perform a mean-field stability analysis and perform numerical simulations of the model. Several interesting types of…

adap-org · Physics 2009-10-28 Erik M. Rauch , Mark M. Millonas , Dante R. Chialvo

In the study of dynamical systems on networks/graphs, a key theme is how the network topology influences stability for steady states or synchronized states. Ideally, one would like to derive conditions for stability or instability that…

Dynamical Systems · Mathematics 2020-07-01 Raffaella Mulas , Christian Kuehn , Jürgen Jost

Real-world datasets are inherently heterogeneous, yet how per-class structural differences and sampling imbalance shape the training dynamics of diffusion models-and potentially exacerbate disparities-remains poorly understood. While models…

Machine Learning · Statistics 2026-05-08 Flavio Nicoletti , Chenxiao Ma , Enrico Ventura , Luca Saglietti , Stefano Sarao Mannelli

In this paper, we address the problem of dynamic network embedding, that is, representing the nodes of a dynamic network as evolving vectors within a low-dimensional space. While the field of static network embedding is wide and…

Social and Information Networks · Computer Science 2023-11-17 Ed Davis , Ian Gallagher , Daniel John Lawson , Patrick Rubin-Delanchy

Humans naturally obtain intuition about the interactions between and the stability of rigid objects by observing and interacting with the world. It is this intuition that governs the way in which we regularly configure objects in our…

Robotics · Computer Science 2025-03-20 Luzhe Sun , Takuma Yoneda , Samuel W. Wheeler , Tianchong Jiang , Matthew R. Walter

The stability of ecosystems as well as the relation between topology and dynamics on multilayer networks are important questions that are usually discussed in separate communities. Here, we combine these two topics by investigating the…

Populations and Evolution · Quantitative Biology 2015-07-24 Jonas Richhardt , Sebastian Plitzko , Florian Schwarzmüller , Barbara Drossel

Diffusion describes the motion of microscopic entities from regions of high concentration to regions of low concentration. In multiplex networks, flows can occur both within and across layers, and super-diffusion, a regime where the time…

Physics and Society · Physics 2019-04-02 Giulia Cencetti , Federico Battiston

We investigate global stability and dynamics of large ecological networks by classical methods of the dynamical system theory, including Hamiltonian methods, and averaging. Our analysis exploits the network topological structure, namely,…

Analysis of PDEs · Mathematics 2015-10-05 Vladimir Kozlov , Sergey Vakulenko , Uno Wennergren

Biological systems are majorly dependent on their property of bistability in order to exhibit nongenetic heterogeneity in terms of cellular morphology and physiology. Spatial patterns of phenotypically heterogeneous cells, arising due to…

Quantitative Methods · Quantitative Biology 2023-01-25 Priya Chakraborty , Ushasi Roy , Mohit K. Jolly , Sayantari Ghosh

Biological networks of interacting agents exhibit similar topological properties for a wide range of scales, from cellular to ecological levels, suggesting the existence of a common evolutionary origin. A general evolutionary mechanism…

Disordered Systems and Neural Networks · Physics 2010-10-25 Juan I. Perotti , Orlando V. Billoni , Francisco A. Tamarit , Sergio A. Cannas

We perform the linear stability analysis for a new model for poromechanical processes with inertia (formulated in mixed form using the solid deformation, fluid pressure, and total pressure) interacting with diffusing and reacting solutes…

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