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We study the problem of how well a tree metric is able to preserve the sum of pairwise distances of an arbitrary metric. This problem is closely related to low-stretch metric embeddings and is interesting by its own flavor from the line of…

Data Structures and Algorithms · Computer Science 2013-01-16 Mong-Jen Kao , Der-Tsai Lee , Dorothea Wagner

To improve our understanding of connected systems, different tools derived from statistics, signal processing, information theory and statistical physics have been developed in the last decade. Here, we will focus on the graph comparison…

Physics and Society · Physics 2018-04-23 Johann H. Martínez , Mario Chavez

The matching problem is a notorious combinatorial optimization problem that has attracted for many years the attention of the statistical physics community. Here we analyze the Euclidean version of the problem, i.e. the optimal matching…

Disordered Systems and Neural Networks · Physics 2017-01-11 Carlo Lucibello , Giorgio Parisi , Gabriele Sicuro

This paper proposes a local search algorithm for a specific combinatorial optimisation problem in graph theory: the Hamiltonian Completion Problem (HCP) on undirected graphs. In this problem, the objective is to add as few edges as possible…

Discrete Mathematics · Computer Science 2020-07-03 Jorik Jooken , Pieter Leyman , Patrick De Causmaecker

Short spanning trees subject to additional constraints are important building blocks in various approximation algorithms. Especially in the context of the Traveling Salesman Problem (TSP), new techniques for finding spanning trees with…

Data Structures and Algorithms · Computer Science 2023-09-13 Martin Nägele , Rico Zenklusen

We present a message-passing algorithm to solve the edge disjoint path problem (EDP) on graphs incorporating under a unique framework both traffic optimization and path length minimization. The min-sum equations for this problem present an…

Disordered Systems and Neural Networks · Physics 2016-01-21 Fabrizio Altarelli , Alfredo Braunstein , Luca Dall'Asta , Caterina De Bacco , Silvio Franz

We describe a general probabilistic framework to address a variety of Frechet-distance optimization problems. Specifically, we are interested in finding minimal bottleneck-paths in $d$-dimensional Euclidean space between given start and…

Computational Geometry · Computer Science 2016-07-12 Kiril Solovey , Dan Halperin

We describe several algorithms for matrix completion and matrix approximation when only some of its entries are known. The approximation constraint can be any whose approximated solution is known for the full matrix. For low rank…

Numerical Analysis · Mathematics 2014-07-01 Gil Shabat , Yaniv Shmueli , Amir Averbuch

We present two algorithms for large-scale low-rank Euclidean distance matrix completion problems, based on semidefinite optimization. Our first method works by relating cliques in the graph of the known distances to faces of the positive…

Optimization and Control · Mathematics 2015-08-27 Dmitriy Drusvyatskiy , Nathan Krislock , Yuen-Lam Voronin , Henry Wolkowicz

In this paper, we study the problem of finding the Euclidean distance to a convex cone generated by a set of discrete points in $\mathbb{R}^n_+$. In particular, we are interested in problems where the discrete points are the set of feasible…

Optimization and Control · Mathematics 2017-04-24 Ali Fattahi , Sriram Dasu , Reza Ahmadi

Finding a minimum spanning tree (MST) for $n$ points in an arbitrary metric space is a fundamental primitive for hierarchical clustering and many other ML tasks, but this takes $\Omega(n^2)$ time to even approximate. We introduce a…

Data Structures and Algorithms · Computer Science 2025-02-19 Nate Veldt , Thomas Stanley , Benjamin W. Priest , Trevor Steil , Keita Iwabuchi , T. S. Jayram , Geoffrey Sanders

Matrix completion is a problem that arises in many data-analysis settings where the input consists of a partially-observed matrix (e.g., recommender systems, traffic matrix analysis etc.). Classical approaches to matrix completion assume…

Machine Learning · Computer Science 2017-05-02 Natali Ruchansky , Mark Crovella , Evimaria Terzi

The Molecular Distance Geometry Problem (MDGP) is essential in structural biology, as it seeks to determine three-dimensional protein structures from partial interatomic distances. Its discretizable subclass (DMDGP) admits an exact…

Optimization and Control · Mathematics 2025-10-24 Leonardo D. Secchin , Wagner da Rocha , Mariana da Rosa , Leo Liberti , Carlile Lavor

The Earth Mover Distance (EMD) between two sets of points $A, B \subseteq \mathbb{R}^d$ with $|A| = |B|$ is the minimum total Euclidean distance of any perfect matching between $A$ and $B$. One of its generalizations is asymmetric EMD,…

Computational Complexity · Computer Science 2019-09-25 Dhruv Rohatgi

The minimum degree spanning tree (MDST) problem requires the construction of a spanning tree $T$ for graph $G=(V,E)$ with $n$ vertices, such that the maximum degree $d$ of $T$ is the smallest among all spanning trees of $G$. In this paper,…

Data Structures and Algorithms · Computer Science 2018-06-12 Michael Dinitz , Magnús M. Halldórsson , Calvin Newport

We study the classic Euclidean Minimum Spanning Tree (MST) problem in the Massively Parallel Computation (MPC) model. Given a set $X \subset \mathbb{R}^d$ of $n$ points, the goal is to produce a spanning tree for $X$ with weight within a…

Data Structures and Algorithms · Computer Science 2023-08-02 Rajesh Jayaram , Vahab Mirrokni , Shyam Narayanan , Peilin Zhong

A fundamental problem for wireless ad hoc networks is the assignment of suitable transmission powers to the wireless devices such that the resulting communication graph is connected. The goal is to minimize the total transmit power in order…

Data Structures and Algorithms · Computer Science 2014-03-25 Maurits de Graaf , Bodo Manthey

In this paper, we consider the minimum spanning tree problem (for short, MSTP) on an arbitrary set of $n$ points of $d$-dimensional space in $l_1$-norm. For this problem, for each fixed $d\geq 2$, there is a known algorithm of the…

Discrete Mathematics · Computer Science 2024-12-12 K. V. Kaymakov , D. S. Malyshev

Recent years have witnessed a surge of biological interest in the minimum spanning tree (MST) problem for its relevance to automatic model construction using the distances between data points. Despite the increasing use of MST algorithms…

Quantitative Methods · Quantitative Biology 2015-11-02 Momoko Hayamizu , Hiroshi Endo , Kenji Fukumizu

The problem of completing high-dimensional matrices from a limited set of observations arises in many big data applications, especially, recommender systems. Existing matrix completion models generally follow either a memory- or a…

Machine Learning · Computer Science 2019-09-30 Duc Minh Nguyen , Robert Calderbank , Nikos Deligiannis