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We describe the combinatorics of equilibria and steady states of neurons in threshold-linear networks that satisfy Dale's law. The combinatorial code of a Dale network is characterized in terms of two conditions: (i) a condition on the…

Neurons and Cognition · Quantitative Biology 2024-06-07 Nikola Milićević , Vladimir Itskov

We introduce the factor complex of a neural code, and show how intervals and maximal codewords are captured by the combinatorics of factor complexes. We use these results to obtain algebraic and combinatorial characterizations of…

Combinatorics · Mathematics 2019-10-22 Alexander Ruys de Perez , Laura Felicia Matusevich , Anne Shiu

Why do neurons encode information the way they do? Normative answers to this question model neural activity as the solution to an optimisation problem; for example, the celebrated efficient coding hypothesis frames neural activity as the…

Neurons and Cognition · Quantitative Biology 2026-03-06 William Dorrell , Peter E. Latham , James Whittington

The central problem with understanding brain and mind is the neural code issue: understanding the matter of our brain as basis for the phenomena of our mind. The richness with which our mind represents our environment, the parsimony of…

Neurons and Cognition · Quantitative Biology 2018-11-06 Christoph von der Malsburg

This dissertation explores applications of discrete geometry in mathematical neuroscience. We begin with convex neural codes, which model the activity of hippocampal place cells and other neurons with convex receptive fields. In Chapter 4,…

Neurons and Cognition · Quantitative Biology 2022-09-19 Caitlin Lienkaemper

Much work has been done to identify which binary codes can be represented by collections of open convex or closed convex sets. While not all binary codes can be realized by such sets, here we prove that every binary code can be realized by…

Combinatorics · Mathematics 2018-04-30 Megan K. Franke , Samuel Muthiah

Grid cells in the entorhinal cortex fire when animals that are exploring a certain region of space occupy the vertices of a triangular grid that spans the environment. Different neurons feature triangular grids that differ in their…

Neurons and Cognition · Quantitative Biology 2017-01-04 Alessandro Sanzeni , Vijay Balasubramanian , Guido Tiana , Massimo Vergassola

Place cells in the hippocampus are active when an animal visits a certain location (referred to as a place field) within an environment. Grid cells in the medial entorhinal cortex (MEC) respond at multiple locations, with firing fields that…

Neurons and Cognition · Quantitative Biology 2018-05-17 David M. Schwartz , O. Ozan Koyluoglu

The invariance of natural objects under perceptual changes is possibly encoded in the brain by symmetries in the graph of synaptic connections. The graph can be established via unsupervised learning in a biologically plausible process…

Neural and Evolutionary Computing · Computer Science 2023-05-30 Helmut Linde

Hippocampal neurons track positions of self, others, and gaze direction. However, it is unclear how their respective neural codes differ enough to avoid confusion while allowing for abstraction. We recorded from populations of hippocampal…

Grid cells in the entorhinal cortex encode the position of an animal in its environment using spatially periodic tuning curves of varying periodicity. Recent experiments established that these cells are functionally organized in discrete…

Neurons and Cognition · Quantitative Biology 2016-01-13 Noga Weiss Mosheiff , Haggai Agmon , Avraham Moriel , Yoram Burak

A major area in neuroscience research is the study of how the brain processes spatial information. Neurons in the brain represent external stimuli via neural codes. These codes often arise from stereotyped stimulus-response maps,…

Neurons and Cognition · Quantitative Biology 2016-10-03 Ethan Petersen , Nora Youngs , Ryan Kruse , Dane Miyata , Rebecca Garcia , Luis David Garcia Puente

Decades of research on the neural code underlying spatial navigation have revealed a diverse set of neural response properties. The Entorhinal Cortex (EC) of the mammalian brain contains a rich set of spatial correlates, including grid…

Neurons and Cognition · Quantitative Biology 2018-05-11 Christopher J. Cueva , Xue-Xin Wei

Neurons in the brain represent external stimuli via neural codes. These codes often arise from stimulus-response maps, associating to each neuron a convex receptive field. An important problem confronted by the brain is to infer properties…

Neurons and Cognition · Quantitative Biology 2014-09-10 Nora Youngs

Grid cells in medial entorhinal cortex are believed to play a key role in path integration. However, the relation between path integration and the grid-like arrangement of their firing field remains unclear. We provide theoretical evidence…

Neural and Evolutionary Computing · Computer Science 2016-06-06 Reza Moazzezi

Grid cells in the medial entorhinal cortex (MEC) of the mammalian brain exhibit a strikingly regular hexagonal firing field over space. These cells are learned after birth and are thought to support spatial navigation but also more abstract…

Neurons and Cognition · Quantitative Biology 2024-10-07 Mufeng Tang , Helen Barron , Rafal Bogacz

Encoding information about continuous variables using noisy computational units is a challenge; nonetheless, asymptotic theory shows that combining multiple periodic scales for coding can be highly precise despite the corrupting influence…

Neurons and Cognition · Quantitative Biology 2013-08-22 Alexander Mathis , Andreas V. M. Herz , Martin B. Stemmler

In the mammalian brain, many neuronal ensembles are involved in representing spatial structure of the environment. In particular, there exist cells that encode the animal's location and cells that encode head direction. A number of studies…

Neurons and Cognition · Quantitative Biology 2021-08-10 Y. Dabaghian

It is a fundamental behavior that different individuals see the world in a largely similar manner. This is an essential basis for humans' ability to cooperate and communicate. However, what are the neuronal properties that underlie these…

Neurons and Cognition · Quantitative Biology 2024-07-12 Ofer Lipman , Shany Grossman , Doron Friedman , Yacov Hel-Or , Rafael Malach

To afford flexible behaviour, the brain must build internal representations that mirror the structure of variables in the external world. For example, 2D space obeys rules: the same set of actions combine in the same way everywhere (step…

Neurons and Cognition · Quantitative Biology 2025-03-04 William Dorrell , Peter E. Latham , Timothy E. J. Behrens , James C. R. Whittington