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Modern graphics processing units (GPUs) provide impressive computing resources, which can be accessed conveniently through the CUDA programming interface. We describe how GPUs can be used to considerably speed up molecular dynamics (MD)…

Computational Physics · Physics 2011-04-08 Peter H. Colberg , Felix Höfling

We introduce Breadth-First Pipeline Parallelism, a novel training schedule which optimizes the combination of pipeline and data parallelism. Breadth-First Pipeline Parallelism lowers training time, cost and memory usage by combining a high…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-07-10 Joel Lamy-Poirier

To define and identify a region-of-interest (ROI) in a digital image, the shape descriptor of the ROI has to be described in terms of its boundary characteristics. To address the generic issues of contour tracking, the yConvex Hypergraph…

Distributed, Parallel, and Cluster Computing · Computer Science 2013-07-10 Saurabh Jha , Tejaswi Agarwal , B. Rajesh Kanna

Today, very large amounts of data are produced and stored in all branches of society including science. Mining these data meaningfully has become a considerable challenge and is of the broadest possible interest. The size, both in numbers…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-06-11 Andreas Vitalis

Priority queue, often implemented as a heap, is an abstract data type that has been used in many well-known applications like Dijkstra's shortest path algorithm, Prim's minimum spanning tree, Huffman encoding, and the branch-and-bound…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-06-18 Yanhao Chen , Fei Hua , Chaozhang Huang , Jeremy Bierema , Chi Zhang , Eddy Z. Zhang

We present cudaclaw, a CUDA-based high performance data-parallel framework for the solution of multidimensional hyperbolic partial differential equation (PDE) systems, equations describing wave motion. cudaclaw allows computational…

Mathematical Software · Computer Science 2018-05-24 H. Gorune Ohannessian , George Turkiyyah , Aron Ahmadia , David Ketcheson

In competitive parallel computing, the identical copies of a code in a phase of a sequential program are assigned to processor cores and the result of the fastest core is adopted. In the literature, it is reported that a superlinear speedup…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-08-22 Naoki Yonezawa

Diffusion models have achieved remarkable progress in high-fidelity image, video, and audio generation, yet inference remains computationally expensive. Nevertheless, current diffusion acceleration methods based on distributed parallelism…

Computer Vision and Pattern Recognition · Computer Science 2026-02-26 Euisoo Jung , Byunghyun Kim , Hyunjin Kim , Seonghye Cho , Jae-Gil Lee

Computing platforms equipped with accelerators like GPUs have proven to provide great computational power. However, exploiting such platforms for existing scientific applications is not a trivial task. Current GPU programming frameworks…

High Energy Physics - Lattice · Physics 2014-08-27 F. T. Winter , M. A. Clark , R. G. Edwards , B. Joó

In this paper, we implemented both sequential and parallel version of fractal image compression algorithms using CUDA (Compute Unified Device Architecture) programming model for parallelizing the program in Graphics Processing Unit for…

Distributed, Parallel, and Cluster Computing · Computer Science 2014-04-04 Md. Enamul Haque , Abdullah Al Kaisan , Mahmudur R Saniat , Aminur Rahman

The CUDACPP plugin for MadGraph5_aMC@NLO aims to accelerate leading order tree-level event generation by providing the MadEvent event generator with data-parallel helicity amplitudes. These amplitudes are written in templated C++ and CUDA,…

High Energy Physics - Phenomenology · Physics 2025-08-01 Stephan Hageböck , Daniele Massaro , Olivier Mattelaer , Stefan Roiser , Andrea Valassi , Zenny Wettersten

While parallelism remains the main source of performance, architectural implementations and programming models change with each new hardware generation, often leading to costly application re-engineering. Most tools for performance…

Programming Languages · Computer Science 2022-07-04 William S. Moses , Ivan R. Ivanov , Jens Domke , Toshio Endo , Johannes Doerfert , Oleksandr Zinenko

A hierarchical parallelization has been implemented in a new unified code PIMD-SMASH for ab initio simulation where the replicas and the Born-Oppenheimer forces are parallelized. It is demonstrated that ab initio path integral molecular…

Chemical Physics · Physics 2016-02-17 Sergi Ruiz-Barragan , Kazuya Ishimura , Motoyuki Shiga

Traditionally, high energy physics (HEP) experiments have relied on x86 CPUs for the majority of their significant computing needs. As the field looks ahead to the next generation of experiments such as DUNE and the High-Luminosity LHC, the…

In this paper we solve on GPUs massive problems with large amount of data, which are not appropriate for solution with the SIMD technology. For the given problem we consider a three-level parallelization. The multithreading of CPU is used…

Distributed, Parallel, and Cluster Computing · Computer Science 2014-02-18 Natalya Litvinenko

Motivated by the observation that FIFO-based push-relabel algorithms are able to outperform highest label-based variants on modern, large maximum flow problem instances, we introduce an efficient implementation of the algorithm that uses…

Data Structures and Algorithms · Computer Science 2015-07-27 Niklas Baumstark , Guy Blelloch , Julian Shun

Autoregressive decoding of large language models (LLMs) is memory bandwidth bounded, resulting in high latency and significant wastes of the parallel processing power of modern accelerators. Existing methods for accelerating LLM decoding…

Machine Learning · Computer Science 2024-02-06 Yichao Fu , Peter Bailis , Ion Stoica , Hao Zhang

This report discusses the implementation of two parallel algorithms on a distributed memory system for studying vortex dynamics in type-II superconductors. These algorithms are the same as that implemented for classical molecular dynamics…

Superconductivity · Physics 2007-05-23 Mahesh Chandran

Polynomial systems occur in many areas of science and engineering. Unlike general nonlinear systems, the algebraic structure enables to compute all solutions of a polynomial system. We describe our massive parallel predictor-corrector…

Mathematical Software · Computer Science 2015-05-05 Jan Verschelde , Xiangcheng Yu

We present SymPhas 2.0, a major update of the compile-time symbolic algebra simulation framework SymPhas for phase-field and reaction-diffusion models. This release introduces significant expansions and enhancements that enable the…

Computational Physics · Physics 2025-11-14 Steven A. Silber , Mikko Karttunen
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