Related papers: The infochemical core
Deep generative models of molecules have grown immensely in popularity, trained on relevant datasets, these models are used to search through chemical space. The downstream utility of generative models for the inverse design of novel…
One of the ultimate goals for linguists is to find universal properties in human languages. Although words are generally considered as representing arbitrary mapping between linguistic forms and meanings, we propose a new universal law that…
The success of neural networks on a diverse set of NLP tasks has led researchers to question how much these networks actually ``know'' about natural language. Probes are a natural way of assessing this. When probing, a researcher chooses a…
Cross-lingual topic models have been prevalent for cross-lingual text analysis by revealing aligned latent topics. However, most existing methods suffer from producing repetitive topics that hinder further analysis and performance decline…
We investigate correlations in information carriers, e.g. texts and pieces of music, which are represented by strings of letters. For information carrying strings generated by one source (i.e. a novel or a piece of music) we find…
Discursive knowledge emerges as codification in flows of communication. The flows of communication are constrained and enabled by networks of communications as their historical manifestations at each moment of time. New publications modify…
Idioms are figurative expressions whose meanings often cannot be inferred from their individual words, making them difficult to process computationally and posing challenges for human experimental studies. This survey reviews datasets…
Human language has a distinct systematic structure, where utterances break into individually meaningful words which are combined to form phrases. We show that natural-language-like systematicity arises in codes that are constrained by a…
We provide a fundamental treatment of the molecular communication channel wherein "inscribed matter" is transmitted across a spatial gap to provide reliable signaling between a sender and receiver. Inscribed matter is defined as an ensemble…
Biological signaling is imagined as a combination of activation and transport. The former is triggered by local molecular interactions and the latter is the result of molecular diffusion. However, other fundamental physical principles of…
Self-organization is the generation of order out of local interactions in non-equilibrium [1]. It is deeply connected to all fields of science from physics, chemistry to biology where functional living structures self-assemble[2] and…
Eukaryotic cells transmit information by signaling through complex networks of interacting proteins. Here we develop a theoretical and computational framework that relates the biophysics of protein-protein interactions (PPIs) within a…
Organized knowledge production can then be considered as the codification of communication. Communications leave traces that can be studied as indicators. Institutions can be considered as retention mechanisms functional for the…
Inter and intra-cellular signaling are essential for individual cells to execute various physiological tasks and accurately respond to changes in their environment. Signaling is carried out via diffusible molecules, the transport of which…
We typically think of cells as responding to external signals independently by regulating their gene expression levels, yet they often locally exchange information and coordinate. Can such spatial coupling be of benefit for conveying…
In this paper, we propose adding enzymes to the propagation environment of a diffusive molecular communication system as a strategy for mitigating intersymbol interference. The enzymes form reaction intermediates with information molecules…
Causal processes can give rise to distinctive distributions in the linguistic variables that they affect. Consequently, a secure understanding of a variable's distribution can hold a key to understanding the forces that have causally shaped…
Language enables humans to share knowledge, reason about the world, and pass on strategies for survival and innovation across generations. At the heart of this process is not just the ability to communicate but also the remarkable…
All living languages change over time. The causes for this are many, one being the emergence and borrowing of new linguistic elements. Competition between the new elements and older ones with a similar semantic or grammatical function may…
This article examines recent research in molecular communications from a telecommunications system design perspective. In particular, it focuses on channel models and state-of-the-art physical layer techniques. The goal is to provide a…