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Fast, incremental evolution of physics instrumentation raises the question of efficient software abstraction and transferability of algorithms across similar technologies. This contribution aims to provide an answer by introducing Track…
OLAF (Open Life Science Analysis Framework) is an open-source platform that enables researchers to perform bioinformatics analyses using natural language. By combining large language models (LLMs) with a modular agent-pipe-router…
Turning the current experimental plasma accelerator state-of-the-art from a promising technology into mainstream scientific tools depends critically on high-performance, high-fidelity modeling of complex processes that develop over a wide…
The advent of affordable parallel computers such as Beowulf PC clusters and, more recently, of multi-core PCs has been highly beneficial for a large number of scientists and smaller institutions that might not otherwise have access to…
We present an open source software package SpectroLab a Matlab-based tool developed in 2018 for the analysis of spectroscopic data. In this package, there are tools for derivative analysis, stacked energy contours, stacked plots for theory,…
Recently, some challenging tasks in multi-agent systems have been solved by some hierarchical reinforcement learning methods. Inspired by the intra-level and inter-level coordination in the human nervous system, we propose a novel value…
Searching for geometric objects that are close in space is a fundamental component of many applications. The performance of search algorithms comes to the forefront as the size of a problem increases both in terms of total object count as…
The open-source PyNX toolkit [Favre-Nicolin et al (2011) arXiv:1010.2641, Mandula et al (2016)] has been extended to provide tools for coherent X-ray imaging data analysis and simulation. All calculations can be executed on graphical…
Advances in sequencing techniques have led to exponential growth in biological data, demanding the development of large-scale bioinformatics experiments. Because these experiments are computation- and data-intensive, they require…
Automated heart sounds classification is a much-required diagnostic tool in the view of increasing incidences of heart related diseases worldwide. In this study, we conduct a comprehensive study of heart sounds classification by using…
We present RAVEn, a self-supervised multi-modal approach to jointly learn visual and auditory speech representations. Our pre-training objective involves encoding masked inputs, and then predicting contextualised targets generated by…
We present PlanetPack, a new software tool that we developed to facilitate and standardize the advanced analysis of radial velocity (RV) data for the goal of exoplanets detection, characterization, and basic dynamical $N$-body simulations.…
HEP-Frame is a new C++ package designed to efficiently perform analyses of data sets from a very large number of events, like those available at the Large Hadron Collider (LHC) at CERN, Geneva. It mainly targets high performance servers and…
Energy-efficient medical data classification is essential for modern disease screening, particularly in home and field healthcare where embedded devices are prevalent. While deep learning models achieve state-of-the-art accuracy, their…
The Matlab toolbox SciXMiner is designed for the visualization and analysis of time series and features with a special focus to classification problems. It was developed at the Institute of Applied Computer Science of the Karlsruhe…
Bioacoustics, the study of sounds produced by living organisms, plays a vital role in conservation, biodiversity monitoring, and behavioral studies. Many tasks in this field, such as species, individual, and behavior classification and…
We present RAVEN an adaptive AI agent framework designed for multimodal entity discovery and retrieval in large-scale video collections. Synthesizing information across visual, audio, and textual modalities, RAVEN autonomously processes…
Passive acoustic monitoring is an emerging approach in wildlife research that leverages recent improvements in purpose-made automated recording units (ARUs). The general approach is to deploy ARUs in the field to record on a programmed…
Large language models have shown a remarkable ability to extract meaning from unstructured data, offering new ways to interpret biomedical signals beyond traditional numerical methods. In this study, we present a matrix factorization…
Retrieval-Augmented Generation (RAG) relies on large-scale Approximate Nearest Neighbor Search (ANNS) to retrieve semantically relevant context for large language models. Among ANNS methods, IVF-PQ offers an attractive balance between…