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Related papers: Microtubule Defects Influence Kinesin-Based Transp…

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Cells control fluid flows with a spatial and temporal precision that far exceeds the capabilities of current microfluidic technologies. Cells achieve this superior spatio-temporal control by harnessing dynamic networks of cytoskeleton and…

Soft Condensed Matter · Physics 2025-05-26 Fan Yang , Shichen Liu , Heun Jin Lee , Rob Phillips , Matt Thomson

Self-organization of kinesin-driven, microtubule-based 3D active fluids relies on the collective dynamics of single microtubules. However, the connection between macroscopic fluid flows and microscopic motion of microtubules remains…

Soft Condensed Matter · Physics 2019-04-29 Teagan E. Bate , Edward J. Jarvis , Megan E. Varney , Kun-Ta Wu

Single molecular motor kinesin harnesses thermal and non-thermal fluctuations to transport various cargoes along microtubules, converting chemical energy to directed movements. To describe the non-thermal fluctuations generated by the…

Soft Condensed Matter · Physics 2022-12-20 Mengkai Feng , Zhonghuai Hou

The presence of membrane tubules in living cells is essential to many biological processes. In cells, one mechanism to form nanosized lipid tubules is via molecular motor induced bilayer extraction. In this paper, we describe a simple…

Biomolecules · Quantitative Biology 2016-10-04 Chai Lor , Joseph D. Lopes , Michelle K. Mattson-Hoss , Jing Xu , Linda S. Hirst

Collective cell migration governs a range of physiological and pathological processes, from tissue morphogenesis to cancer invasion, in which topological defects arise as an inevitable consequence of frequent cellular rearrangement and…

Soft Condensed Matter · Physics 2026-04-01 Jiusi Zhang , Chung Wing Chan , Bo Li , Rui Zhang

Here we study a driven lattice gas model for microtubule depolymerizing molecular motors, where traffic jams of motors induce stochastic switching between microtubule growth and shrinkage. We term this phenomenon \enquote{traffic dynamic…

Statistical Mechanics · Physics 2015-05-07 Louis Reese , Anna Melbinger , Erwin Frey

The cytoskeleton is a model active matter system that controls diverse cellular processes from division to motility. While both active actomyosin dynamics and actin-microtubule interactions are key to the cytoskeleton's versatility and…

The ability of cells to move through small spaces depends on the mechanical properties of the cellular cytoskeleton and on nuclear deformability. In mammalian cells, the cytoskeleton is comprised of three interacting, semi-flexible polymer…

Biological Physics · Physics 2021-10-27 Sarthak Gupta , Alison E. Patteson , J. M. Schwarz

Motor-driven intracellular transport of organelles, vesicles, and other molecular cargo is a highly collective process. An individual cargo is often pulled by a team of transport motors, with numbers ranging from only a few to several…

Statistical Mechanics · Physics 2022-01-06 Matthew P. Leighton , David A. Sivak

We propose a stochastic model that accounts for the growth, catastrophe and rescue processes of steady state microtubules assembled from MAP-free tubulin. Both experimentally and theoretically we study the perturbation of microtubule…

Biological Physics · Physics 2015-05-20 Peter Hinow , Vahid Rezania , Manu Lopus , Mary Ann Jordan , Jack A. Tuszynski

Conventional analysis of in vitro assays of motor proteins rests on the assumption that all proteins with the same chemical composition function identically; however molecule-to-molecule variation is often seen even in well-controlled…

Many biological and artificial transport channels function without direct input of metabolic energy during a transport event and without structural rearrangements involving transitions from a 'closed' to an 'open' state. Nevertheless, such…

Subcellular Processes · Quantitative Biology 2009-11-13 Anton Zilman

Inspired by recent experiments on the dynamics of particles and polymers in artificial cytoskeletons and in cells, we introduce a modified Langevin equation for a particle in an environment that is a viscoelastic medium and that is brought…

Soft Condensed Matter · Physics 2016-11-08 Hans Vandebroek , Carlo Vanderzande

Cells are complex structures which require considerable amounts of organization via transport of large intracellular cargo. While passive diffusion is often sufficiently fast for the transport of smaller cargo, active transport is necessary…

Biomolecules · Quantitative Biology 2018-08-29 Robert Blackwell , David Jung , Mona Bukenberger , Ana-Sunčana Smith

The efficiency of intracellular cargo transport from specific source to target locations is strongly dependent upon molecular motor-assisted motion along the cytoskeleton. Radial transport along microtubules and lateral transport along the…

Biological Physics · Physics 2018-03-30 Anne E. Hafner , Heiko Rieger

Three problems in the statistical mechanics of models for an assembly of molecular motors interacting with cytoskeletal filaments are reviewed. First, a description of the hydrodynamical behaviour of density-density correlations in…

Statistical Mechanics · Physics 2009-11-11 Gautam I. Menon

Microtubules and motor proteins are building blocks of self-organized subcellular biological structures such as the mitotic spindle and the centrosomal microtubule array. These same ingredients can form new "bioactive" liquid-crystalline…

Soft Condensed Matter · Physics 2015-01-29 Tong Gao , Robert Blackwell , Matthew A. Glaser , M. D. Betterton , Michael J. Shelley

Filament based intracellular transport involves the collective action of molecular motor proteins. Experimental evidences suggest that microtubule (MT) filament bound motor proteins such as {\it kinesins} weakly interact among themselves…

Soft Condensed Matter · Physics 2015-06-23 Sameep Chandel , Abhishek Chaudhuri , Sudipto Muhuri

In the present paper we deal with nonlinear dynamics of microtubules (MTs). The structure and role of MTs in cells are explained. One model explaining MT dynamics is explained. Solutions of the crucial nonlinear differential equation depend…

Biological Physics · Physics 2025-01-22 Slobodan Zdravković

Kinetic-transport equations that take into account the intra-cellular pathways are now considered as the correct description of bacterial chemotaxis by run and tumble. Recent mathematical studies have shown their interest and their…

Analysis of PDEs · Mathematics 2018-06-13 Benoît Perthame , Weiran Sun , Min Tang
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