Related papers: An adaptive fast multipole accelerated Poisson sol…
We present a direct Poisson solver for massively parallel simulations on three-dimensional Cartesian grids with non-uniform spacing. The method uses a tensor-based formulation in which the operator is diagonalized numerically along two…
We present a fully adaptive multiresolution scheme for spatially two-dimensional, possibly degenerate reaction-diffusion systems, focusing on combustion models and models of pattern formation and chemotaxis in mathematical biology.…
In this paper, we present a GPU-accelerated direct-sum boundary integral method to solve the linear Poisson-Boltzmann (PB) equation. In our method, a well-posed boundary integral formulation is used to ensure the fast convergence of Krylov…
The design, implementation and analysis of a free library for boundary element calculations is presented. The library is free in the sense of the GNU General Public Licence and is intended to allow users to solve a wide range of problems…
We consider the Poisson equation with homogeneous Dirichlet conditions in a family of domains in $R^{n}$ indexed by a small parameter $\epsilon$. The domains depend on $\epsilon$ only within a ball of radius proportional to $\epsilon$ and,…
The Hamiltonian structure of ideal translationally symmetric extended MHD (XMHD) is obtained by employing a method of Hamiltonian reduction on the three-dimensional noncanonical Poisson bracket of XMHD. The existence of the continuous…
For continuous boundary data, including data of polynomial growth, modified Poisson integrals are used to write solutions to the half space Dirichlet and Neumann problems in $\mathbb{R}^{n}$. Pointwise growth estimates for these integrals…
An efficient direct solver for volume integral equations with O(N) complexity for a broad range of problems is presented. The solver relies on hierarchical compression of the discretized integral operator, and exploits that off-diagonal…
It is found the exact solution of the Poisson equation for the multidimensional space with topology $M_{3+d}=\mathbb{R}^3\times T^d$. This solution describes smooth transition from the newtonian behavior $1/r_3$ for distances bigger than…
We introduce a fast algorithm for computing volume potentials - that is, the convolution of a translation invariant, free-space Green's function with a compactly supported source distribution defined on a uniform grid. The algorithm relies…
We deal with accelerating the solution of a sequence of large linear systems solved by preconditioned conjugate gradient method (PCG). The sequence originates from time-stepping within a simulation of an unsteady incompressible flow. We…
The solution of the Poisson equation is a ubiquitous problem in computational astrophysics. Most notably, the treatment of self-gravitating flows involves the Poisson equation for the gravitational field. In hydrodynamics codes using…
In this paper we propose an accurate, and computationally efficient method for incorporating adaptive spatial resolution into weakly-compressible Smoothed Particle Hydrodynamics (SPH) schemes. Particles are adaptively split and merged in an…
In this paper, we consider the problem of accelerating the numerical simulation of time dependent problems by time domain decomposition. The available algorithms enabling such decompositions present severe efficiency limitations and are an…
We develop a universally applicable embedded boundary finite difference method, which results in a symmetric positive definite linear system and does not suffer from small cell stiffness. Our discretization is efficient for the wave, heat…
We introduce a technique to automatically convert local boundary conditions into nonlocal volume constraints for nonlocal Poisson's and peridynamic models. The proposed strategy is based on the approximation of nonlocal Dirichlet or Neumann…
The very weak solution of the Poisson equation with $L^2$ boundary data is defined by the method of transposition. The finite element solution with regularized boundary data converges with order $1/2$ in convex domains but has a reduced…
We present a new multi-fluid, multi-temperature plasma solver with adaptive Cartesian mesh (ACM) based on a full-Newton (non-linear, implicit) scheme for collisional low-temperature plasma. The particle transport is described using the…
We present a high order, Fourier penalty method for the Maxwell's equations in the vicinity of perfect electric conductor boundary conditions. The approach relies on extending the smooth non-periodic domain of the equations to a periodic…
Experimentally-measured pressure fields play an important role in understanding many fluid dynamics problems. Unfortunately, pressure fields are difficult to measure directly with non-invasive, spatially resolved diagnostics, and…