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The interaction between natural selection and random mutation is frequently debated in recent years. Does similar dilemma also exist in the evolution of real networks such as biological networks? In this paper, we try to discuss this issue…

Statistical Mechanics · Physics 2009-01-07 Zhen Shao , Hai-jun Zhou

Dendrograms are a way to represent evolutionary relationships between organisms. Nowadays, these are inferred based on the comparison of genes or protein sequences by taking into account their differences and similarities. The genetic…

Molecular Networks · Quantitative Biology 2019-09-09 Daniel Gamermann , Arnau Montagud , J. Alberto Conejero , Pedro Fernández de Córdoba , Javier F. Urchueguía

Multiplex networks are collections of networks with identical nodes but distinct layers of edges. They are genuine representations for a large variety of real systems whose elements interact in multiple fashions or flavors. However,…

Physics and Society · Physics 2024-02-27 Daniel Kaiser , Siddharth Patwardhan , Minsuk Kim , Filippo Radicchi

Cosine similarity has become a standard metric for comparing embeddings in modern machine learning. Its scale-invariance and alignment with model training objectives have contributed to its widespread adoption. However, recent studies have…

Machine Learning · Computer Science 2025-05-21 Kisung You

We consider the general form of the linear transformation for point rotation coordinate frames. The frames have the rotation axis at every point. In the transformation the frequency of one frame relative to another is not equivalent to the…

Optics · Physics 2007-05-23 Boris V. Gisin

The recent rise of interest in bidirectional transformations (BXs) has led to the development of many BX frameworks, originating in diverse computer science disciplines. From a user perspective, these frameworks vary significantly in both…

Programming Languages · Computer Science 2013-06-27 Hugo Pacheco , Nuno Macedo , Alcino Cunha , Janis Voigtländer

Transformer architectures are increasingly effective at processing and generating very long chunks of texts, opening new perspectives for document-level machine translation (MT). In this work, we challenge the ability of MT systems to…

Computation and Language · Computer Science 2025-04-29 Ziqian Peng , Rachel Bawden , François Yvon

Traditional approaches to interpolate/extrapolate frames in a video sequence require accurate pixel correspondences between images, e.g., using optical flow. Their results stem on the accuracy of optical flow estimation, and could generate…

Computer Vision and Pattern Recognition · Computer Science 2018-03-21 Zhe Hu , Yinglan Ma , Lizhuang Ma

Many complex networks are only a part of larger systems, where a number of coexisting topologies interact and depend on each other. We introduce a layered model to facilitate the description and analysis of such systems. As an example of…

Physics and Society · Physics 2007-05-23 Maciej Kurant , Patrick Thiran

In the last 15 years, the Internet architecture has continued evolving organically, introducing new headers and protocols to the classic TCP/IP stack. More specifically, we have identified two major trends. First, it is common that most…

Networking and Internet Architecture · Computer Science 2022-08-11 Jordi Paillisse , Alberto Rodriguez-Natal , Fabio Maino , Albert Cabellos

Graph filters are a staple tool for processing signals over graphs in a multitude of downstream tasks. However, they are commonly designed for graphs with a fixed number of nodes, despite real-world networks typically grow over time. This…

Machine Learning · Computer Science 2024-09-12 Bishwadeep Das , Elvin Isufi

Recent years have witnessed a widespread increase of interest in network representation learning (NRL). By far most research efforts have focused on NRL for homogeneous networks like social networks where vertices are of the same type, or…

Social and Information Networks · Computer Science 2020-03-25 Ming Gao , Xiangnan He , Leihui Chen , Tingting Liu , Jinglin Zhang , Aoying Zhou

The current state-of-the-art for image annotation and image retrieval tasks is obtained through deep neural networks, which combine an image representation and a text representation into a shared embedding space. In this paper we evaluate…

Computer Vision and Pattern Recognition · Computer Science 2017-08-10 Armand Vilalta , Dario Garcia-Gasulla , Ferran Parés , Eduard Ayguadé , Jesus Labarta , Ulises Cortés , Toyotaro Suzumura

Real-world networks are composed of diverse interacting and evolving entities, while most of existing researches simply characterize them as particular static networks, without consideration of the evolution trend in dynamic networks.…

Social and Information Networks · Computer Science 2020-06-16 Yu Xie , Chunyi Li , Bin Yu , Chen Zhang , Zhouhua Tang

The evolution of the user's content still remains a problem for an accurate recommendation.This is why the current research aims to design Recommender Systems (RS) able to continually adapt information that matches the user's interests.…

Information Retrieval · Computer Science 2013-05-09 Djallel Bouneffouf

Government organizations, regulators, consumers, Internet service providers, and application providers alike all have an interest in measuring user Internet "speed". Access speeds have increased by an order of magnitude in past years, with…

Networking and Internet Architecture · Computer Science 2019-11-04 Nick Feamster , Jason Livingood

Subgraphs and cycles are often used to characterize the local properties of complex networks. Here we show that the subgraph structure of real networks is highly time dependent: as the network grows, the density of some subgraphs remains…

Disordered Systems and Neural Networks · Physics 2009-11-11 Alexei Vazquez , Joao G. Oliveira , Albert-Laszlo Barabasi

Understanding the origins of complexity is a fundamental challenge with implications for biological and technological systems. Network theory emerges as a powerful tool to model complex systems. Networks are an intuitive framework to…

Disordered Systems and Neural Networks · Physics 2024-10-22 Blai Vidiella , Salva Duran-Nebreda , Sergi Valverde

The focus of user behavior in the Internet has changed over the recent years towards being driven by exchanging and accessing information. Many advances in networking technologies have utilized this change by focusing on the content of an…

Networking and Internet Architecture · Computer Science 2012-01-12 Marie-Jose Montpetit , Cedric Westphal , Dirk Trossen

Large Language Models (LLMs) have demonstrated inherent calibration capabilities, where predicted probabilities align well with correctness, despite prior findings that deep neural networks are often overconfident. Recent studies have…

Machine Learning · Computer Science 2025-11-04 Abhinav Joshi , Areeb Ahmad , Ashutosh Modi