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Most recent person re-identification approaches are based on the use of deep convolutional neural networks (CNNs). These networks, although effective in multiple tasks such as classification or object detection, tend to focus on the most…

Computer Vision and Pattern Recognition · Computer Science 2021-02-19 Abdallah Benzine , Mohamed El Amine Seddik , Julien Desmarais

Early and accurate detection through Pap smear analysis is critical to improving patient outcomes and reducing mortality of Cervical cancer. State-of-the-art (SOTA) Convolutional Neural Networks (CNNs) require substantial computational…

Tissues and Organs · Quantitative Biology 2025-09-23 Saifuddin Sagor , Md Taimur Ahad , Faruk Ahmed , Rokonozzaman Ayon , Sanzida Parvin

Proteins perform essential biological functions, and accurate classification of their sequences is critical for understanding structure-function relationships, enzyme mechanisms, and molecular interactions. This study presents a deep…

Quantitative Methods · Quantitative Biology 2025-11-19 Pratik Chakraborty , Aryan Bhargava

Organ segmentation in CT volumes is an important pre-processing step in many computer assisted intervention and diagnosis methods. In recent years, convolutional neural networks have dominated the state of the art in this task. However,…

Image and Video Processing · Electrical Eng. & Systems 2020-12-08 Roger D. Soberanis-Mukul , Nassir Navab , Shadi Albarqouni

Evolutionary Neural Architecture Search (ENAS) can automatically design the architectures of Deep Neural Networks (DNNs) using evolutionary computation algorithms. However, most ENAS algorithms require intensive computational resource,…

Machine Learning · Computer Science 2020-09-08 Yanan Sun , Xian Sun , Yuhan Fang , Gary Yen

Connectionist temporal classification (CTC) is a popular sequence prediction approach for automatic speech recognition that is typically used with models based on recurrent neural networks (RNNs). We explore whether deep convolutional…

Computation and Language · Computer Science 2018-02-16 Kalpesh Krishna , Liang Lu , Kevin Gimpel , Karen Livescu

The goal of this work is to investigate the possibility of improving current gamma/hadron discrimination based on their shower patterns recorded on the ground. To this end we propose the use of Convolutional Neural Networks (CNNs) for their…

Neural and Evolutionary Computing · Computer Science 2019-09-27 Filipe Assunção , João Correia , Rúben Conceição , Mário Pimenta , Bernardo Tomé , Nuno Lourenço , Penousal Machado

An important part of breast cancer staging is the assessment of the sentinel axillary node for early signs of tumor spreading. However, this assessment by pathologists is not always easy and retrospective surveys often requalify the status…

Quantitative Methods · Quantitative Biology 2024-04-30 Eric Bonnet

We show that deep convolutional neural networks (CNN) can massively outperform traditional densely-connected neural networks (both deep or shallow) in predicting eigenvalue problems in mechanics. In this sense, we strike out in a new…

Computational Physics · Physics 2018-07-19 David Finol , Yan Lu , Vijay Mahadevan , Ankit Srivastava

Flow-Imaging Microscopy (FIM) is commonly used in both academia and industry to characterize subvisible particles (those $\le 25 \mu m$ in size) in protein therapeutics. Pharmaceutical companies are required to record vast volumes of FIM…

Quantitative Methods · Quantitative Biology 2017-09-04 Christopher P. Calderon , Austin L. Daniels , Theodore W. Randolph

We adopt convolutional neural networks (CNN) to predict the basic properties of the porous media. Two different media types are considered: one mimics the sand packings, and the other mimics the systems derived from the extracellular space…

Computational Physics · Physics 2023-06-21 Krzysztof M. Graczyk , Dawid Strzelczyk , Maciej Matyka

This study proposes an efficient neural network with convolutional layers to classify significantly class-imbalanced clinical data. The data are curated from the National Health and Nutritional Examination Survey (NHANES) with the goal of…

Quantitative Methods · Quantitative Biology 2020-04-24 Aniruddha Dutta , Tamal Batabyal , Meheli Basu , Scott T. Acton

Noise in the expression of a gene produces fluctuations in the concentration of the gene product. These fluctuations can interfere with optimal function or can be exploited to generate beneficial diversity between cells; gene expression…

Molecular Networks · Quantitative Biology 2015-05-13 Namiko Mitarai , Ian B. Dodd , Michael T. Crooks , Kim Sneppen

Convolutional Neural Networks (CNNs) have been recently introduced in the domain of session-based next item recommendation. An ordered collection of past items the user has interacted with in a session (or sequence) are embedded into a…

Information Retrieval · Computer Science 2018-11-30 Fajie Yuan , Alexandros Karatzoglou , Ioannis Arapakis , Joemon M Jose , Xiangnan He

Colorectal and prostate cancers are the most common types of cancer in men worldwide. To diagnose colorectal and prostate cancer, a pathologist performs a histological analysis on needle biopsy samples. This manual process is time-consuming…

Image and Video Processing · Electrical Eng. & Systems 2023-01-31 Remy Peyret , Duaa alSaeed , Fouad Khelifi , Nadia Al-Ghreimil , Heyam Al-Baity , Ahmed Bouridane

It is important to study on genes affecting to growing environment of main crops. Especially the recognition problem of promoter region, which is the problem to predict whether DNA sequences contain promoter regions or not, is prior to find…

Genomics · Quantitative Biology 2018-11-20 Un-Hyang Ho , Hye-Ok Kong

The subcellular location of a protein can provide valuable information about its function. With the rapid increase of sequenced genomic data, the need for an automated and accurate tool to predict subcellular localization becomes…

Neural and Evolutionary Computing · Computer Science 2007-10-12 Sabu M. Thampi , K. Chandra Sekaran

Convolutional Neural Networks (CNNs) have shown strong promise for analyzing scientific data from many domains including particle imaging detectors. However, the challenge of choosing the appropriate network architecture (depth, kernel…

Computer Vision and Pattern Recognition · Computer Science 2020-01-13 Duc Hoang , Jesse Hamer , Gabriel N. Perdue , Steven R. Young , Jonathan Miller , Anushree Ghosh

Convolutional neural networks (CNN) are known for their excellent feature extraction capabilities to enable the learning of models from data, yet are used as black boxes. An interpretation of the convolutional filtres and associated…

Machine Learning · Computer Science 2022-07-27 Shagufta Henna , Juan Miguel Lopez Alcaraz

Motivation: Deep learning architectures have recently demonstrated their power in predicting DNA- and RNA-binding specificities. Existing methods fall into three classes: Some are based on Convolutional Neural Networks (CNNs), others use…

Machine Learning · Computer Science 2019-01-31 Ameni Trabelsi , Mohamed Chaabane , Asa Ben Hur