Related papers: Deep Multi-Species Embedding
Reliable large-scale data on the state of forests is crucial for monitoring ecosystem health, carbon stock, and the impact of climate change. Current knowledge of tree species distribution relies heavily on manual data collection in the…
As is true of many complex tasks, the work of discovering, describing, and understanding the diversity of life on Earth (viz., biological systematics and taxonomy) requires many tools. Some of this work can be accomplished as it has been…
This paper demonstrates the advantages of sharing information about unknown features of covariates across multiple model components in various nonparametric regression problems including multivariate, heteroscedastic, and semi-continuous…
We introduce a dynamic multiscale tree (DMT) architecture that learns how to leverage the strengths of different existing classifiers for supervised multi-label image segmentation. Unlike previous works that simply aggregate or cascade…
Entropy and mutual information in neural networks provide rich information on the learning process, but they have proven difficult to compute reliably in high dimensions. Indeed, in noisy and high-dimensional data, traditional estimates in…
Deep ensembles have been empirically shown to be a promising approach for improving accuracy, uncertainty and out-of-distribution robustness of deep learning models. While deep ensembles were theoretically motivated by the bootstrap,…
In real-world complex networks, understanding the dynamics of their evolution has been of great interest to the scientific community. Predicting future links is an essential task of social network analysis as the addition or removal of the…
Spectral embedding finds vector representations of the nodes of a network, based on the eigenvectors of a properly constructed matrix, and has found applications throughout science and technology. Many networks are multipartite, meaning…
In this work, we focus on the task of learning and representing dense correspondences in deformable object categories. While this problem has been considered before, solutions so far have been rather ad-hoc for specific object types (i.e.,…
Current advances in next generation sequencing techniques have allowed researchers to conduct comprehensive research on microbiome and human diseases, with recent studies identifying associations between human microbiome and health outcomes…
Many complex systems in the real world can be characterized by attributed networks. To mine the potential information in these networks, deep embedded clustering, which obtains node representations and clusters simultaneously, has been paid…
Given a union of non-linear manifolds, non-linear subspace clustering or manifold clustering aims to cluster data points based on manifold structures and also learn to parameterize each manifold as a linear subspace in a feature space. Deep…
One of the first beings affected by changes in the climate are trees, one of our most vital resources. In this study tree species interaction and the response to climate in different ecological environments is observed by applying a joint…
Can intelligence optimise Digital Ecosystems? How could a distributed intelligence interact with the ecosystem dynamics? Can the software components that are part of genetic selection be intelligent in themselves, as in an adaptive…
1. Citizen and community-science (CS) datasets have great potential for estimating interannual patterns of population change given the large volumes of data collected globally every year. Yet, the flexible protocols that enable many CS…
Accelerating global biodiversity loss has highlighted the role of complex relationships and shared patterns among species in determining their responses to environmental changes. The structure of an ecological community, represented by…
Aerial-view geo-localization tends to determine an unknown position through matching the drone-view image with the geo-tagged satellite-view image. This task is mostly regarded as an image retrieval problem. The key underpinning this task…
Deep learning models have significantly advanced acoustic bird monitoring by being able to recognize numerous bird species based on their vocalizations. However, traditional deep learning models are black boxes that provide no insight into…
A central problem in biology is to understand how organisms evolve and adapt to their environment by acquiring variations in the observable characteristics or traits of species across the tree of life. With the growing availability of…
Statistical clustering in dynamic networks aims to identify groups of nodes with similar or distinct internal connectivity patterns as the network evolves over time. While early research primarily focused on static Stochastic Block Models…