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Related papers: Analysing degeneracies in networks spectra

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Spectra of real world networks exhibit properties which are different from the random networks. One such property is the existence of a very high degeneracy at zero eigenvalues. In this work, we provide possible reasons behind occurrence of…

Disordered Systems and Neural Networks · Physics 2015-07-28 Alok Yadav , Sarika Jalan

Network representations are useful for describing the structure of a large variety of complex systems. Although most studies of real-world networks suppose that nodes are connected by only a single type of edge, most natural and engineered…

Physics and Society · Physics 2020-08-05 Rubén J. Sánchez-García , Emanuele Cozzo , Yamir Moreno

Many real-world complex networks contain a significant amount of structural redundancy, in which multiple vertices play identical topological roles. Such redundancy arises naturally from the simple growth processes which form and shape many…

Physics and Society · Physics 2020-08-05 Ben D. MacArthur , Rubén J. Sánchez-García

We investigate the impact of degree-degree correlations on the spectra of networks. Even though density distributions exhibit drastic changes depending on the (dis)assortative mixing and the network architecture, the short range…

Physics and Society · Physics 2015-02-06 Sarika Jalan , Alok Yadav

Networks are often studied using the eigenvalues of their adjacency matrix, a powerful mathematical tool with a wide range of applications. Since in real systems the exact graph structure is not known, researchers resort to random graphs to…

Spectral Theory · Mathematics 2020-01-30 Pau Vilimelis Aceituno

The study of complex networks has been one of the most active fields in science in recent decades. Spectral properties of networks (or graphs that represent them) are of fundamental importance. Researchers have been investigating these…

Combinatorics · Mathematics 2018-09-25 Daniel Montealegre , Van Vu

This review presents an account of the major works done on spectra of adjacency matrices drawn on networks and the basic understanding attained so far. We have divided the review under three sections: (a) extremal eigenvalues, (b) bulk part…

Disordered Systems and Neural Networks · Physics 2018-12-20 Camellia Sarkar , Sarika Jalan

The eigenvalues of matrices representing the structure of large-scale complex networks present a wide range of applications, from the analysis of dynamical processes taking place in the network to spectral techniques aiming to rank the…

Social and Information Networks · Computer Science 2015-03-17 Victor M. Preciado , Ali Jadbabaie

Complex network null models based on entropy maximization are becoming a powerful tool to characterize and analyze data from real systems. However, it is not easy to extract good and unbiased information from these models: A proper…

Physics and Society · Physics 2015-12-09 Oleguer Sagarra , Conrad J. Pérez Vicente , Albert Díaz-Guilera

We analyse growing networks ranging from collaboration graphs of scientists to the network of similarities defined among the various transcriptional profiles of living cells. For the explicit demonstration of the scale-free nature and…

Statistical Mechanics · Physics 2009-11-10 I. Farkas , I. Derenyi , H. Jeong , Z. Neda , Z. N. Oltvai , E. Ravasz , A. Schubert , A. -L. Barabasi , T. Vicsek

Networks of genetic expression can be modelled by hypergraphs with the additional structure that real coefficients are given to each vertex-edge incidence. The spectra, i.e. the multiset of the eigenvalues, of such hypergraphs, are known to…

Molecular Networks · Quantitative Biology 2021-09-24 Raffaella Mulas , Michael J. Casey

We investigate gene interaction networks in various cancer cells by spectral analysis of the adjacency matrices. We observe localization of the networks on hub genes which have extraordinarily many links. The eigenvector centralities take…

Molecular Networks · Quantitative Biology 2019-09-25 Ayumi Kikkawa

Determining the effect of structural perturbations on the eigenvalue spectra of networks is an important problem because the spectra characterize not only their topological structures, but also their dynamical behavior, such as…

Disordered Systems and Neural Networks · Physics 2010-05-04 Attilio Milanese , Jie Sun , Takashi Nishikawa

In a complex network, different groups of nodes may have existed for different amounts of time. To detect the evolutionary history of a network is of great importance. We present a general method based on spectral analysis to address this…

Physics and Society · Physics 2012-02-21 Zhu Guimei , Yang Huijie , Yang Rui , Ren Jie , Li Baowen , Lai Ying-Cheng

We propose a general approach to the description of spectra of complex networks. For the spectra of networks with uncorrelated vertices (and a local tree-like structure), exact equations are derived. These equations are generalized to the…

Statistical Mechanics · Physics 2009-11-10 S. N. Dorogovtsev , A. V. Goltsev , J. F. F. Mendes , A. N. Samukhin

Many natural and social systems develop complex networks, that are usually modelled as random graphs. The eigenvalue spectrum of these graphs provides information about their structural properties. While the semi-circle law is known to…

Statistical Mechanics · Physics 2009-11-07 Illes J. Farkas , Imre Derenyi , Albert-Laszlo Barabasi , Tamas Vicsek

Dynamical networks are powerful tools for modeling a broad range of complex systems, including financial markets, brains, and ecosystems. They encode how the basic elements (nodes) of these systems interact altogether (via links) and evolve…

Physics and Society · Physics 2019-03-13 Edward Laurence , Nicolas Doyon , Louis J Dubé , Patrick Desrosiers

Neural networks are powerful functions with widespread use, but the theoretical behaviour of these functions is not fully understood. Creating deep neural networks by stacking many layers has achieved exceptional performance in many…

Machine Learning · Computer Science 2024-08-16 Cameron Jakub , Mihai Nica

One of the most challenging problems in biomedicine and genomics is the identification of disease biomarkers. In this study, proteomics data from seven major cancers were used to construct two weighted protein-protein interaction (PPI)…

Molecular Networks · Quantitative Biology 2019-10-07 Pramod Shinde , Loic Marrec , Aparna Rai , Alok Yadav , Rajesh Kumar , Mikhail Ivanchenko , Alexey Zaikin , Sarika Jalan

Spectral analysis connects graph structure to the eigenvalues and eigenvectors of associated matrices. Much of spectral graph theory descends directly from spectral geometry, the study of differentiable manifolds through the spectra of…

Social and Information Networks · Computer Science 2019-05-24 Kun Dong , Austin R. Benson , David Bindel
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