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Mitochondrial and nuclear genomes must be co-adapted to ensure proper cellular respiration and energy production. Mito-nuclear incompatibility reduces individual fitness and induces hybrid infertility, suggesting a possible role in…

Populations and Evolution · Quantitative Biology 2022-10-12 Débora Princepe , Marcus A. M. de Aguiar , Joshua B. Plotkin

We present numerical results based on a simplified ecological system in evolution, showing features of extinction similar to that claimed for the biosystem on Earth. In the model each species consists of a population in interaction with the…

adap-org · Physics 2009-10-28 Guillermo Abramson

Resource competition theory predicts coexistence and exclusion patterns based on species R*s, the minimum resource values required for a species to persist. A central assumption of the theory is that all species have equal access to…

Populations and Evolution · Quantitative Biology 2021-11-17 Man Qi , Niv DeMalach , Tao Sun , Hailin Zhang

Simulations of the coevolution of many interacting species are performed using the Webworld model. The model has a realistic set of predator-prey equations that describe the population dynamics of the species for any structure of the food…

Adaptation and Self-Organizing Systems · Physics 2007-05-23 Christopher Quince , Paul G. Higgs , Alan J. McKane

The environment has a strong influence on a population's evolutionary dynamics. Driven by both intrinsic and external factors, the environment is subject to continual change in nature. To capture an ever-changing environment, we consider a…

Populations and Evolution · Quantitative Biology 2022-02-18 Qi Su , Alex McAvoy , Long Wang , Martin A. Nowak

We study the interplay between evolutionary game and network structure and show how the dynamics of the game affect the growth pattern of the network and how the evolution of the network influence the cooperative behavior in the game.…

Physics and Society · Physics 2007-05-23 Jie Ren , Xiang Wu , Wen-Xu Wang , Guanrong Chen , Bing-Hong Wang

We investigate the formation of stable ecological networks where many species share the same resource. We show that such stable ecosystem naturally occurs as a result of extinctions. We obtain an analytical relation for the number of…

Populations and Evolution · Quantitative Biology 2017-04-05 V. Kozlov , S. Vakulenko , U. Wennergren

Predator-prey coevolution is commonly thought to result in reciprocal arms races that produce increasingly extreme and complex traits. However, such directional change is not inevitable. Here, we provide evidence for a previously…

Populations and Evolution · Quantitative Biology 2014-02-18 Aaron P Wagner , Luis Zaman , Ian Dworkin , Charles Ofria

The distributions of species lifetimes and species in space are related, since species with good local survival chances have more time to colonize new habitats and species inhabiting large areas have higher chances to survive local…

Populations and Evolution · Quantitative Biology 2019-02-18 Tobias Rogge , David Jones , Barbara Drossel , Korinna T. Allhoff

Numerous traits under migration-selection balance are shown to exhibit complex patterns of genetic architecture with large variance in effect sizes. However, the conditions under which such genetic architectures are stable have yet to be…

Populations and Evolution · Quantitative Biology 2022-11-01 Léonard Dekens , Sarah P. Otto , Vincent Calvez

Evolutionary adaptation is often likened to climbing a hill or peak. While this process is simple for fitness landscapes where mutations are independent, the interaction between mutations (epistasis) as well as mutations at loci that affect…

Populations and Evolution · Quantitative Biology 2013-02-15 Bjørn Østman , Arend Hintze , Christoph Adami

The self-protection of alliances against external invaders is a key concept behind the maintenance of biodiversity in the face of natural selection. But since these alliances, which can be formed by different numbers of competitors, can…

Populations and Evolution · Quantitative Biology 2022-12-07 Attila Szolnoki , Matjaz Perc

Certain invasive plants may rely on interference mechanisms (allelopathy, e.g.) to gain competitive superiority over native species. But expending resources on interference presumably exacts a cost in another life-history trait, so that the…

Populations and Evolution · Quantitative Biology 2012-06-08 Andrew Allstadt , Thomas Caraco , F. Molnar , G. Korniss

We study a set of six-species ecological models where each species has two predators and two preys. On a square lattice the time evolution is governed by iterated invasions between the neighboring predator-prey pairs chosen at random and by…

Populations and Evolution · Quantitative Biology 2009-11-10 Gyorgy Szabo

The role of species interactions in controlling the interplay between the stability of an ecosystem and its biodiversity is still not well understood. The ability of ecological communities to recover after a small perturbation of the…

Populations and Evolution · Quantitative Biology 2016-06-15 Jacopo Grilli , Matteo Adorisio , Samir Suweis , György Barabás , Jayanth R. Banavar , Stefano Allesina , Amos Maritan

Camouflage in nature seems to arise from competition between predator and prey. To survive, predators must find prey, and prey must avoid being found. This work simulates an abstract model of that adversarial relationship. It looks at…

Graphics · Computer Science 2025-02-17 Craig Reynolds

Understanding how a diversity of plants in agroecosystems affects the adaptation of pathogens in a key issue in agroecology. We analyze PDE systems describing the dynamics of adaptation of two phenotypically structured populations, under…

Analysis of PDEs · Mathematics 2021-03-08 François Hamel , Florian Lavigne , Lionel Roques

This paper is concerned with existence, non-existence and uniqueness of positive (coexistence) steady states to a predator-prey system with density-dependent dispersal. To overcome the analytical obstacle caused by the cross-diffusion…

Analysis of PDEs · Mathematics 2023-04-19 De Tang , Zhi-An Wang

Does an ecological community allow stable coexistence? Identifying the general principles that determine the answer to this question is a central problem of theoretical ecology. Random matrix theory approaches have uncovered the general…

Populations and Evolution · Quantitative Biology 2025-12-12 Yu Meng , Szabolcs Horvát , Carl D. Modes , Pierre A. Haas

Ecological systems comprise an astonishing diversity of species that cooperate or compete with each other forming complex mutual dependencies. The minimum requirements to maintain a large species diversity on long time scales are in general…

Populations and Evolution · Quantitative Biology 2012-09-10 Joachim Mathiesen , Namiko Mitarai , Kim Sneppen , Ala Trusina
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