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We discuss algorithms for estimating the Shannon entropy h of finite symbol sequences with long range correlations. In particular, we consider algorithms which estimate h from the code lengths produced by some compression algorithm. Our…

Statistical Mechanics · Physics 2017-04-24 Thomas Schürmann , Peter Grassberger

Shannon entropy is widely used to measure the complexity of DNA sequences but suffers from saturation effects that limit its discriminative power for long uniform segments. We introduce a novel metric, the entropy rank ratio R, which…

Information Theory · Computer Science 2025-11-10 Emmanuel Pio Pastore , Giuseppe Passarino , Peppino Sapia , Francesco De Rango

Given a set of pattern strings $\mathcal{P}=\{P_1, P_2,\ldots P_k\}$ and a text string $S$, the classic dictionary matching problem is to report all occurrences of each pattern in $S$. We study the dictionary problem in the compressed…

Data Structures and Algorithms · Computer Science 2025-09-04 Philip Bille , Inge Li Gørtz , Simon J. Puglisi , Simon R. Tarnow

This paper proposes a novel entropy encoding technique for lossless data compression. Representing a message string by its lexicographic index in the permutations of its symbols results in a compressed version matching Shannon entropy of…

Information Theory · Computer Science 2017-03-24 Abu Bakar Siddique

A fundamental question in the theory of reinforcement learning is: suppose the optimal $Q$-function lies in the linear span of a given $d$ dimensional feature mapping, is sample-efficient reinforcement learning (RL) possible? The recent and…

Machine Learning · Computer Science 2021-10-22 Yuanhao Wang , Ruosong Wang , Sham M. Kakade

Parameter estimation in Markov random fields (MRFs) is a difficult task, in which inference over the network is run in the inner loop of a gradient descent procedure. Replacing exact inference with approximate methods such as loopy belief…

Machine Learning · Computer Science 2012-06-18 Varun Ganapathi , David Vickrey , John Duchi , Daphne Koller

We consider the problem of computing the Maximal Exact Matches (MEMs) of a given pattern $P[1 .. m]$ on a large repetitive text collection $T[1 .. n]$, which is represented as a (hopefully much smaller) run-length context-free grammar of…

Data Structures and Algorithms · Computer Science 2023-09-06 Gonzalo Navarro

Maximum Entropy is a powerful concept that entails a sharp separation between relevant and irrelevant variables. It is typically invoked in inference, once an assumption is made on what the relevant variables are, in order to estimate a…

Statistical Mechanics · Physics 2018-01-09 Luigi Gresele , Matteo Marsili

We apply the Principle of Maximum Entropy to the study of a general class of deterministic fractal sets. The scaling laws peculiar to these objects are accounted for by means of a constraint concerning the average content of information in…

Statistical Mechanics · Physics 2015-06-25 R. Pastor-Satorras , J. Wagensberg

Two decades ago, a breakthrough in indexing string collections made it possible to represent them within their compressed space while at the same time offering indexed search functionalities. As this new technology permeated through…

Data Structures and Algorithms · Computer Science 2022-11-28 Gonzalo Navarro

The principle of maximum entropy is a broadly applicable technique for computing a distribution with the least amount of information possible while constrained to match empirically estimated feature expectations. However, in many real-world…

Machine Learning · Computer Science 2022-08-16 Kenneth Bogert , Yikang Gui , Prashant Doshi

A simple method for finding the entropy and redundancy of a reasonable long sample of English text by direct computer processing and from first principles according to Shannon theory is presented. As an example, results on the entropy of…

Computation and Language · Computer Science 2009-11-19 Fabio G. Guerrero

We revisit parallel-innermost term rewriting as a model of parallel computation on inductive data structures and provide a corresponding notion of runtime complexity parametric in the size of the start term. We propose automatic techniques…

Logic in Computer Science · Computer Science 2026-04-08 Thaïs Baudon , Carsten Fuhs , Laure Gonnord

Probabilistic language generators are theoretically modeled as discrete stochastic processes, yet standard decoding strategies (Top-k, Top-p) impose static truncation rules that fail to accommodate the dynamic information density of natural…

Computation and Language · Computer Science 2026-03-17 Deepon Halder , Raj Dabre

The Shannon Noiseless coding theorem (the data-compression principle) asserts that for an information source with an alphabet $\mathcal X=\{0,\ldots ,\ell -1\}$ and an asymptotic equipartition property, one can reduce the number of stored…

Information Theory · Computer Science 2016-04-26 Yuri Suhov , Izabella Stuhl

A well-known fact in the field of lossless text compression is that high-order entropy is a weak model when the input contains long repetitions. Motivated by this, decades of research have generated myriads of so-called dictionary…

Data Structures and Algorithms · Computer Science 2020-12-17 Dominik Kempa , Nicola Prezza

We present new lower and upper bounds for the compression rate of binary prefix codes optimized over memoryless sources according to two related exponential codeword length objectives. The objectives explored here are exponential-average…

Information Theory · Computer Science 2011-05-03 Michael B. Baer

We observe an infinite sequence of independent identically distributed random variables $X_1,X_2,\ldots$ drawn from an unknown distribution $p$ over $[n]$, and our goal is to estimate the entropy $H(p)=-\mathbb{E}[\log p(X)]$ within an…

Information Theory · Computer Science 2025-04-24 Tomer Berg , Or Ordentlich , Ofer Shayevitz

Language prediction is constrained by informational entropy intrinsic to language, such that there exists a limit to how accurate any language model can become and equivalently a lower bound to language compression. The most efficient…

Computation and Language · Computer Science 2025-11-14 Benjamin L. Badger , Matthew Neligeorge

Construct recursively a long string of words w1. .. wn, such that at each step k, w k+1 is a new word with a fixed probability p $\in$ (0, 1), and repeats some preceding word with complementary probability 1 -- p. More precisely, given a…

Probability · Mathematics 2019-06-26 Jean Bertoin