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The formation and motion of lattice defects such as cracks, dislocations, or grain boundaries, occurs when the lattice configuration loses stability, that is, when an eigenvalue of the Hessian of the lattice energy functional becomes…

Numerical Analysis · Mathematics 2015-05-13 Matthew Dobson , Mitchell Luskin , Christoph Ortner

Crystal structure modeling with graph neural networks is essential for various applications in materials informatics, and capturing SE(3)-invariant geometric features is a fundamental requirement for these networks. A straightforward…

Machine Learning · Computer Science 2025-03-05 Yusei Ito , Tatsunori Taniai , Ryo Igarashi , Yoshitaka Ushiku , Kanta Ono

We compare within an unifying formalism the dynamical properties of modulated and composite aperiodic (incommensurate) crystals. We discuss the concept of inner polarization and we define an inner polarization parameter beta that…

Materials Science · Physics 2009-11-07 O. Radulescu , T. Janssen , J. Etrillard

When a system has more than one stable state, how can the stability of these states be compared? This deceptively simple question has important consequences for ecosystems, because systems with alternative stable states can undergo dramatic…

Populations and Evolution · Quantitative Biology 2015-10-26 Ben C. Nolting , Karen C. Abbott

Crystal Structure Prediction (CSP) of molecular crystals plays a central role in applications, such as pharmaceuticals and organic electronics. CSP is challenging and computationally expensive due to the need to explore a large search space…

We introduce a computational method to discover polymorphs in molecular crystals at finite temperature. The method is based on reproducing the crystallization process starting from the liquid and letting the system discover the relevant…

Chemical Physics · Physics 2020-04-10 Pablo M. Piaggi , Michele Parrinello

Analytic expressions for the energy eigenvalues and eigenfunctions of a one-dimensional harmonic crystal are obtained. The average energy and density profiles are obtained numerically as a function of temperature. A surprisingly large…

Quantum Physics · Physics 2021-08-30 Phil Attard

Detection of crystal structures from particle positions of crystalline assemblies formed in computer simulations is an unsolved problem. The standard protocol, formulated in the reciprocal space, for structure determination from…

Materials Science · Physics 2025-04-29 Sumitava Kundu , Kaustav Chakraborty , Avisek Das

Dynamical density functional simulations reveal structural aspects of crystal nucleation in undercooled liquids: the first appearing solid is amorphous, which promotes the nucleation of bcc crystals, but suppresses the appearance of the fcc…

Materials Science · Physics 2015-05-30 Gyula I. Tóth , Tamás Pusztai , György Tegze , Gergely Tóth , László Gránásy

Charged colloidal crystals exhibit a subtle interplay between electrostatic screening and elastic deformation. In an anisotropic elastic medium the coupling between dilation and the local ionic environment becomes direction dependent,…

Soft Condensed Matter · Physics 2026-04-21 Hao Wu , Zhong-Can Ou-Yang

In the study of crystal nucleation via computer simulations, hard spheres are arguably the most extensively explored model system. Nonetheless, even in this simple model system, the complex thermodynamics of crystal nuclei can sometimes…

Soft Condensed Matter · Physics 2025-02-19 Marjolein de Jager , Carlos Vega , Pablo Montero de Hijes , Frank Smallenburg , Laura Filion

We consider the theory of fluctuations of a colloidal solid observed in a confocal slice. For a cubic crystal we study the evolution of the projected elastic properties as a function of the anisotropy of the crystal using numerical methods…

Soft Condensed Matter · Physics 2011-10-25 M. Schindler , A. C. Maggs

This paper shows by computer simulations that some crystalline systems have curves in their thermodynamic phase diagrams, so-called isomorphs, along which structure and dynamics in reduced units are invariant to a good approximation. The…

Statistical Mechanics · Physics 2024-01-17 Dan E. Albrechtsen , Andreas E. Olsen , Ulf R. Pedersen , Thomas B. Schrøder , Jeppe C. Dyre

Friction is one of the fundamental issues in physics, mechanics and material science with lots of practical applications. However, the understanding of macroscopic friction phenomena from microscopic aspect is still on the way. In this…

Statistical Mechanics · Physics 2018-10-29 J. Wang , G. F. Wang , W. K. Yuan

We report a study of the phase behavior of multiple-occupancy crystals through simulation. We argue that in order to reproduce the equilibrium behavior of such crystals it is essential to treat the number of lattice sites as a constraining…

Soft Condensed Matter · Physics 2009-11-13 Bianca M. Mladek , Patrick Charbonneau , Daan Frenkel

Experimental data and the principles of quantum mechanics suggest that a crystal is a condensate of `wavicles' enclosed in a box, where `wavicle' denotes the indefinite wave-particle status of the microscopic constituents. When it is not…

Quantum Physics · Physics 2019-03-29 François Fillaux

The relative stability of three-dimensional icosahedral quasicrystals in multi-component systems has been investigated based on a coupled-mode Swift-Hohenberg model with two-length-scales. A recently developed projection method, which…

Soft Condensed Matter · Physics 2020-01-08 Kai Jiang , Wei Si

Obtaining the free energy of large molecules from quantum mechanical energy functions is a longstanding challenge. We describe a method that allows us to estimate, at the quantum mechanical level, the harmonic contributions to the…

Chemical Physics · Physics 2023-03-07 Alec F. White , Chenghan Li , Xing Zhang , Garnet Kin-Lic Chan

The properties of crystals consisting of several components can be widely tuned. Often solid solutions are produced, where substitutional or interstitional disorder determines the crystal thermodynamic and mechanical properties. The…

Soft Condensed Matter · Physics 2019-10-30 Tadeus Ras , Michael Szafarczyk , Matthias Fuchs

The molecular structures of amorphous silica and crystalline quartz are used to predict their intrinsic strength and fracture toughness together with the theoretical strength of silicon dioxide. At the atomic scale, the amorphous silica is…

Materials Science · Physics 2024-10-15 Xiaozhi Hu