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Changing base composition during the evolution of biological sequences can mislead some of the phylogenetic inference techniques in current use. However, detecting whether such a process has occurred may be difficult, since convergent…

Populations and Evolution · Quantitative Biology 2007-05-23 Elizabeth S. Allman , John A. Rhodes

If f is a polynomial with integer coefficients and q is an integer, we may regard f as a map from Z/qZ to Z/qZ. We show that the distribution of the (normalized) spacings between consecutive elements in the image of these maps becomes…

Number Theory · Mathematics 2007-05-23 P. Kurlberg

Random graphs have proven to be one of the most important and fruitful concepts in modern Combinatorics and Theoretical Computer Science. Besides being a fascinating study subject for their own sake, they serve as essential instruments in…

Combinatorics · Mathematics 2007-05-23 Michael Krivelevich , Benny Sudakov

Phylogenetic invariants are certain polynomials in the joint probability distribution of a Markov model on a phylogenetic tree. Such polynomials are of theoretical interest in the field of algebraic statistics and they are also of practical…

Populations and Evolution · Quantitative Biology 2008-01-21 Nicholas Eriksson

Let $r > 0$ be an integer, let $\mathbb{F}_q$ be a finite field of $q$ elements, and let $\mathcal{A}$ be a nonempty proper subset of $\mathbb{F}_q$. Moreover, let $\mathbf{M}$ be a random $m \times n$ rank-$r$ matrix over $\mathbb{F}_q$…

Combinatorics · Mathematics 2023-07-27 Carlo Sanna

The mathematical concept of q-deformations, in particular the one of qnumbers, is used to study the genetic code(s). After considering two kinds of q-numbers, for comparison, a phenomenological classification scheme of the genetic code…

Other Quantitative Biology · Quantitative Biology 2016-07-26 Tidjani Negadi

We survey results on factorizations of non zero-divisors into atoms (irreducible elements) in noncommutative rings. The point of view in this survey is motivated by the commutative theory of non-unique factorizations. Topics covered include…

Rings and Algebras · Mathematics 2017-06-13 Daniel Smertnig

We study the asymptotic behaviour of the trace (the sum of the diagonal parts) of a plane partition of the positive integer n, assuming that this parfition is chosen uniformly at random from the set of all such partitions.

Combinatorics · Mathematics 2011-11-10 Ljuben Mutafchiev , Emil Kamenov

Random invariant manifolds are geometric objects useful for understanding complex dynamics under stochastic influences. Under a nonuniform hyperbolicity or a nonuniform exponential dichotomy condition, the existence of random pseudo-stable…

Dynamical Systems · Mathematics 2009-01-06 Tomas Caraballo , Jinqiao Duan , Kening Lu , Bjorn Schmalfuss

The set of all subsets of any inverse semigroup forms an involution semiring under set-theoretical union and element-wise multiplication and inversion. We find structural conditions on a finite inverse semigroup guaranteeing that neither…

Group Theory · Mathematics 2024-03-13 Igor Dolinka , Sergey V. Gusev , Mikhail V. Volkov

The use of permutation polynomials has appeared, along to their compositional inverses, as a good choice in the implementation of cryptographic systems. Hence, there has been a demand for constructions of these polynomials which…

Number Theory · Mathematics 2020-06-01 Gustavo Terra Bastos

This paper explores the existence and distribution of primitive elements in finite field extensions with prescribed traces in several intermediate field extensions. Our main result provides an inequality-like condition to ensure the…

Number Theory · Mathematics 2021-07-01 Lucas Reis , Sávio Ribas

We survey recent results on some one- and two-dimensional patterns generated by random permutations of natural numbers. In the first part, we discuss properties of random walks, evolving on a one-dimensional regular lattice in discrete time…

Statistical Mechanics · Physics 2009-11-11 G. Oshanin , R. Voituriez , S. Nechaev , O. Vasilyev , F. Hivert

zeta-regularized traces, resp. super-traces, are defined on a classical pseudo-differential operator A by: tr^Q(A):= f.p.tr(A Q^{-z})_{|_{z=0}}, resp. str^Q(A):= f.p.str(A Q^{-z})_{|_{z=0}}, where f.p. refers to the finite part and Q is an…

Mathematical Physics · Physics 2011-07-19 Alexander Cardona , Catherine Ducourtioux , Sylvie Paycha

Let $\mathbb{F}_q$ be a finite field with $q$ elements and denote by $\theta : \mathbb{F}_q\to\mathbb{F}_q$ an automorphism of $\mathbb{F}_q$. In this paper, we deal with skew constacyclic codes, that is, linear codes of $\mathbb{F}_q^n$…

Information Theory · Computer Science 2018-06-11 Alexis E. Almendras Valdebenito , Andrea Luigi Tironi

Trace maps of two-letter substitution rules are investigated with special emphasis on the underlying algebraic structure and on the existence of invariants. We illustrate the results with the generalized Fibonacci chains and show that the…

Mathematical Physics · Physics 2016-09-07 Michael Baake , Uwe Grimm , Dieter Joseph

Polynomials and elements over finite fields exhibit closely related algebraic structures, and many properties defined for elements extend naturally to polynomials. The concepts of order and $\mathbb{F}_q$-Order for elements have been…

Rings and Algebras · Mathematics 2026-01-15 Maithri K. , Vadiraja Bhatta G. R. , Indira K. P. , Prasanna Poojary

In [Frobenius1896] it was shown that many important properties of a finite group could be examined using formulas involving the character ratios of group elements, i.e., the trace of the element acting in a given irreducible representation,…

Representation Theory · Mathematics 2021-07-07 Shamgar Gurevich , Roger Howe

We consider the problem of quantum behavior in the finite background. Introduction of continuum or other infinities into physics leads only to technical complications without any need for them in description of empirical observations. The…

Quantum Physics · Physics 2012-02-15 Vladimir V. Kornyak

Noting a curious link between Andrews' even-odd crank and the Stanley rank, we adopt a combinatorial approach building on the map of conjugation and continue the study of integer partitions with parts separated by parity. Our motivation is…

Number Theory · Mathematics 2025-06-11 Shishuo Fu , Dazhao Tang