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Related papers: Allometric scaling in-vitro

200 papers

Cells control their size to cope with noise during growth and division. Eukaryotic cells exhibiting "sizer" control (targeting a specific size before dividing) may rely on molecular concentration thresholds, but simple implementations of…

Biological Physics · Physics 2026-05-08 Motasem ElGamel , Lucas Ribaudo , Andrew Mugler

Murray's cubic branching law ($\alpha=3$) predicts a universal diameter scaling exponent for all hierarchical transport networks, yet arterial trees yield $\alpha \sim 2.7-2.9$. We show that this discrepancy has a structural origin:…

Biological Physics · Physics 2026-05-29 Riccardo Marchesi

Anomalously large linear and quadratic Zeeman shifts are measured for weakly bound ultracold $^{88}$Sr$_2$ molecules near the intercombination-line asymptote. Nonadiabatic Coriolis coupling and the nature of long-range molecular potentials…

We propose a scaling hypothesis for pattern-forming systems in which modulation of the order parameter results from the competition between a short-ranged interaction and a long-ranged interaction decaying with some power $\alpha$ of the…

Soft Condensed Matter · Physics 2011-01-17 O. Portmann , A. Goelzer , N. Saratz , O. V. Billoni , D. Pescia , A. Vindigni

The metabolic process in a cell is modeled with the use of the Fourier transformation. The histograms of the invariant measures of chaotic attractors are constructed. In particular, a scenario of adaptation of the metabolic process under a…

Chaotic Dynamics · Physics 2017-07-17 V. I Grytsay

Ordered chains (such as chains of amino acids) are ubiquitous in biological cells, and these chains perform specific functions contingent on the sequence of their components. Using the existence and general properties of such sequences as a…

Statistical Mechanics · Physics 2017-04-26 Mobolaji Williams , Eugene Shakhnovich

Energy landscape mappings are performed for two different molecular systems under mechanical loads. Barrier heights are observed to scale as $\Delta U\sim\delta^{3/2}$, where $\delta$ is a residual load. Catastrophe theory predicts that…

Materials Science · Physics 2009-11-11 Craig E. Maloney , Daniel J. Lacks

Intriguing physical phenomena observed in natural materials have inspired the development of several engineering materials with dramatically improved performance. Marine sponge glass fibers, for instance, have attracted interest in recent…

Biological Physics · Physics 2024-11-19 Sayaka Kochiyama , Haneesh Kesari

Biological systems produce outputs in response to variable inputs. Input-output relations tend to follow a few regular patterns. For example, many chemical processes follow the S-shaped Hill equation relation between input concentrations…

Molecular Networks · Quantitative Biology 2013-12-11 Steven A. Frank

Biological membranes constitute boundaries of cells and cell organelles. Physico-chemical mechanisms at the atomic scale are dictated by protein-lipid interaction strength, lipid composition, lipid distribution in the vicinity of the…

Biological Physics · Physics 2015-10-19 N. Ramakrishnan , P. B. Sunil Kumar , Ravi Radhakrishnan

The density crossover scaling of various thermodynamic properties of solutions and melts of self-avoiding and highly flexible polymer chains without chain intersections confined to strictly two dimensions is investigated by means of…

Soft Condensed Matter · Physics 2012-09-03 N. Schulmann , H. Meyer , P. Polińska , J. Baschnagel , J. P. Wittmer

Whole-cell computational models aim to predict cellular phenotypes from genotype by representing the entire genome, the structure and concentration of each molecular species, each molecular interaction, and the extracellular environment.…

Quantitative Methods · Quantitative Biology 2019-09-05 Arthur P. Goldberg , Balázs Szigeti , Yin Hoon Chew , John A. P. Sekar , Yosef D. Roth , Jonathan R. Karr

We introduce an in silico model for the initial spread of an aberrant phenotype with Warburg-like overflow metabolism within a healthy homeostatic tissue in contact with a nutrient reservoir (the blood), aimed at characterizing the role of…

Molecular Networks · Quantitative Biology 2017-06-09 Jorge Fernandez-de-Cossio-Diaz , Andrea De Martino , Roberto Mulet

This work examines the coalescence of two unequal-size spherical liquid droplets in the inviscid regime, with an emphasis on exploring the scaling of the liquid bridge evolution. Our experiment suggests that the classical 1/2 power-law…

Fluid Dynamics · Physics 2024-08-22 Xi Xia , Yicheng Chi , Peng Zhang

Fractal structures and non-Gaussian velocity distributions are characteristic properties commonly observed in virialized self-gravitating systems such as galaxies or interstellar molecular clouds. We study the origin of these properties…

Astrophysics · Physics 2019-08-17 Yasuhide Sota , Osamu Iguchi , Masahiro Morikawa , Takayuki Tatekawa , Kei-ichi Maeda

The glassy cytoplasm, crowded with bio-macromolecules, is fluidized in living cells by mechanical energy derived from metabolism. Characterizing the living cytoplasm as a non-equilibrium system is crucial in elucidating the intricate…

Biological Physics · Physics 2023-07-28 K. Umeda , K. Nishizawa , W. Nagao , S. Inokuchi , Y. Sugino , H. Ebata , D. Mizuno

Attempts to understand zero temperature phase transitions have forced physicists to consider a regime where the standard paradigms of condensed matter physics break down [1-4]. These quantum critical systems lack a simple description in…

Quantum Gases · Physics 2012-07-04 Kaden R. A. Hazzard , Erich J. Mueller

We study the scaling limit of a statistical system, which is a special case of the integrable inhomogeneous six-vertex model. It possesses $U_q\big(\mathfrak{sl}(2)\big)$ invariance due to the choice of open boundary conditions imposed. An…

High Energy Physics - Theory · Physics 2024-06-05 Holger Frahm , Sascha Gehrmann , Gleb A. Kotousov

Based on quasi-stationary distribution ideas, a general finite size scaling theory is proposed for discontinuous nonequilibrium phase transitions into absorbing states. Analogously to the equilibrium case, we show that quantities such as,…

Statistical Mechanics · Physics 2015-12-23 M. M. de Oliveira , M. G. E. da Luz , C. E. Fiore

Metabolic networks are known to be scale free but the evolutionary origin of this structural property is not clearly understood. One way of studying the dynamical process is to compare the metabolic networks of species that have arisen at…

Molecular Networks · Quantitative Biology 2007-05-23 Shalini , Areejit Samal , Varun Giri , Sandeep Krishna , N. Raghuram , Sanjay Jain