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Genetic regulatory networks with adaptive responses are widely studied in biology. Usually, models consisting only of a few nodes have been considered. They present one input receptor for activation and one output node where the adaptive…

Molecular Networks · Quantitative Biology 2016-07-20 Pablo Kaluza , Masayo Inoue

A key challenge for AI is to build embodied systems that operate in dynamically changing environments. Such systems must adapt to changing task contexts and learn continuously. Although standard deep learning systems achieve state of the…

Neural and Evolutionary Computing · Computer Science 2022-04-26 Abhiram Iyer , Karan Grewal , Akash Velu , Lucas Oliveira Souza , Jeremy Forest , Subutai Ahmad

Efficiency is an important issue in designing video architectures for action recognition. 3D CNNs have witnessed remarkable progress in action recognition from videos. However, compared with their 2D counterparts, 3D convolutions often…

Computer Vision and Pattern Recognition · Computer Science 2019-11-22 Zhaoyang Liu , Donghao Luo , Yabiao Wang , Limin Wang , Ying Tai , Chengjie Wang , Jilin Li , Feiyue Huang , Tong Lu

Real world networks exhibit rich temporal information: friends are added and removed over time in online social networks; the seasons dictate the predator-prey relationship in food webs; and the propagation of a virus depends on the network…

Linear conjugacy offers a new perspective to broaden the scope of stable biochemical reaction networks to the systems linearly conjugated to the well-established complex balanced mass action systems ($\ell$cCBMASs). This paper addresses the…

Dynamical Systems · Mathematics 2024-05-27 Xiaoyu Zhang , Shibo He , Chuanhou Gao , Denis Dochain

Agent-based modeling and simulation is a useful method to study biological phenomena in a wide range of fields, from molecular biology to ecology. Since there is currently no agreed-upon standard way to specify such models it is not always…

Quantitative Methods · Quantitative Biology 2010-10-14 Franziska Hinkelmann , David Murrugarra , Abdul Salam Jarrah , Reinhard Laubenbacher

Digital agents are considered a general-purpose technology. They spread quickly in private and organizational contexts, including education. Yet, research lacks a conceptual framing to describe interaction with such agents in a holistic…

Human-Computer Interaction · Computer Science 2024-08-09 Mateusz Dolata , Dzmitry Katsiuba , Natalie Wellnhammer , Gerhard Schwabe

Temporal-network models have provided key insights into how time-varying connectivity shapes dynamical processes such as spreading. Among them, the activity-driven model is a widely used, analytically tractable benchmark. Yet many temporal…

Physics and Society · Physics 2025-11-20 Zsófia Simon , Jari Saramäki

Despite the traditional focus of network science on static networks, most networked systems of scientific interest are characterized by temporal links. By disrupting the paths, link temporality has been shown to frustrate many dynamical…

Adaptation and Self-Organizing Systems · Physics 2018-02-07 Aming Li , Sean P. Cornelius , Yang-Yu Liu , Long Wang , Albert-László Barabási

We use the annealed formulation of complex networks to study the dynamical behavior of disease spreading on both static and adaptive networked systems. This unifying approach relies on the annealed adjacency matrix, representing one network…

Physics and Society · Physics 2010-11-09 Beniamino Guerra , Jesus Gomez-Gardenes

Artificial intelligence systems for scientific discovery have demonstrated remarkable potential, yet existing approaches remain largely proprietary and operate in batch-processing modes requiring hours per research cycle, precluding…

Artificial Intelligence · Computer Science 2026-01-28 Lukas Weidener , Marko Brkić , Mihailo Jovanović , Ritvik Singh , Chiara Baccin , Emre Ulgac , Alex Dobrin , Aakaash Meduri

Networks are a fundamental and flexible way of representing various complex systems. Many domains such as communication, citation, procurement, biology, social media, and transportation can be modeled as a set of entities and their…

Social and Information Networks · Computer Science 2020-08-07 Sumit Purohit , Lawrence B. Holder , George Chin

Many natural and artificial networks evolve in time. Nodes and connections appear and disappear at various timescales, and their dynamics has profound consequences for any processes in which they are involved. The first empirical analysis…

Statistical Mechanics · Physics 2012-05-21 Michele Starnini , Andrea Baronchelli , Alain Barrat , Romualdo Pastor-Satorras

Networks observed in real world like social networks, collaboration networks etc., exhibit temporal dynamics, i.e. nodes and edges appear and/or disappear over time. In this paper, we propose a generative, latent space based, statistical…

Social and Information Networks · Computer Science 2018-11-08 Shubham Gupta , Gaurav Sharma , Ambedkar Dukkipati

In order to describe the firing activity of a homogenous assembly of neurons, we consider time elapsed models, which give mathematical descriptions of the probability density of neurons structured by the distribution of times elapsed since…

Analysis of PDEs · Mathematics 2016-12-28 S Mischler , Q Weng

In this paper, we study the dynamics of epidemic processes taking place in temporal and adaptive networks. Building on the activity-driven network model, we propose an adaptive model of epidemic processes, where the network topology…

Social and Information Networks · Computer Science 2018-02-27 Masaki Ogura , Victor M. Preciado , Naoki Masuda

Recent advances in autonomous LLM agents demonstrate their ability to improve performance through iterative interaction with the environment. We define this paradigm as Test-Time Improvement (TTI). However, the mechanisms under how and why…

Artificial Intelligence · Computer Science 2026-02-04 Hang Yan , Xinyu Che , Fangzhi Xu , Qiushi Sun , Zichen Ding , Kanzhi Cheng , Jian Zhang , Tao Qin , Jun Liu , Qika Lin

The time-elapsed model for neural networks is a nonlinear age structured equationwhere the renewal term describes the network activity and influences the dischargerate, possibly with a delay due to the length of connections.We solve a long…

Analysis of PDEs · Mathematics 2025-03-13 Benoît Perthame , Delphine Salort , Clément Rieutord

Attention Deficit Hyperactivity Disorder (ADHD) is a neurodevelopmental disorder that is challenging to diagnose and requires advanced approaches for reliable and transparent identification and classification. It is characterized by a…

Machine Learning · Computer Science 2026-02-04 Abdul Rehman , Ilona Heldal , Jerry Chun-Wei Lin

Although individual neurons and neural populations exhibit the phenomenon of representational drift, perceptual and behavioral outputs of many neural circuits can remain stable across time scales over which representational drift is…