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The contact structure between hosts has a critical influence on disease spread. However, most networkbased models used in epidemiology tend to ignore heterogeneity in the weighting of contacts. This assumption is known to be at odds with…

Populations and Evolution · Quantitative Biology 2012-09-03 Christel Kamp , Mathieu Moslonka-Lefebvre , Samuel Alizon

We propose a generative model and an inference scheme for epidemic processes on dynamic, adaptive contact networks. Network evolution is formulated as a link-Markovian process, which is then coupled to an individual-level stochastic SIR…

Methodology · Statistics 2020-04-07 Fan Bu , Allison E. Aiello , Jason Xu , Alexander Volfovsky

Intuitively, sampling is likely to be more efficient for prevalence estimation, if the cases (or positives) have a relatively higher representation in the sample than in the population. In case the virus is transmitted via personal…

Applications · Statistics 2020-11-18 Li-Chun Zhang

Infectious disease modeling is used to forecast epidemics and assess the effectiveness of intervention strategies. Although the core assumption of mass-action models of homogeneously mixed population is often implausible, they are…

Physics and Society · Physics 2024-08-29 Thien-Minh Le , Jukka-Pekka Onnela

The theory of rapid mixing random walks plays a fundamental role in the study of modern randomised algorithms. Usually, the mixing time is measured with respect to the worst initial position. It is well known that the presence of…

Probability · Mathematics 2024-01-30 Alberto Espuny Díaz , Patrick Morris , Guillem Perarnau , Oriol Serra

The exploration of epidemic dynamics on dynamically evolving ("adaptive") networks poses nontrivial challenges to the modeler, such as the determination of a small number of informative statistics of the detailed network state (that is, a…

Quantitative Methods · Quantitative Biology 2015-07-07 Assimakis A. Kattis , Alexander Holiday , Ana-Andreea Stoica , Ioannis G. Kevrekidis

To improve our understanding of connected systems, different tools derived from statistics, signal processing, information theory and statistical physics have been developed in the last decade. Here, we will focus on the graph comparison…

Physics and Society · Physics 2018-04-23 Johann H. Martínez , Mario Chavez

We study the problem of containing epidemic spreading processes in temporal networks. We specifically focus on the problem of finding a resource allocation to suppress epidemic infection, provided that an empirical time-series data of…

Social and Information Networks · Computer Science 2019-04-16 Masaki Ogura , Junichi Harada

Complex networks have attracted increasing interest from various fields of science. It has been demonstrated that each complex network model presents specific topological structures which characterize its connectivity and dynamics. Complex…

Data Analysis, Statistics and Probability · Physics 2012-02-20 Wesley Nunes Gonçalves , Alexandre Souto Martinez , Odemir Martinez Bruno

Contact-tracing is an essential tool in order to mitigate the impact of pandemic such as the COVID-19. In order to achieve efficient and scalable contact-tracing in real time, digital devices can play an important role. While a lot of…

This letter investigates the multiple routes transmitted epidemic process on multiplex networks. We propose detailed theoretical analysis that allows us to accurately calculate the epidemic threshold and outbreak size. It is found that the…

Social and Information Networks · Computer Science 2015-06-18 Dawei Zhao , Lixiang Li , Haipeng Peng , Qun Luo , Yixian Yang

The study of SIS epidemics on networks has stressed the role of the network topology on the spreading process. However, accurate models of SIS epidemics rely on the complete knowledge of the network topology, which is often not available.…

Physics and Society · Physics 2017-08-08 Aram Vajdi , Caterina Scoglioy

Understanding the timing of the peak of a disease outbreak forms an important part of epidemic forecasting. In many cases, such information is essential for planning increased hospital bed demand and for designing of public health…

Populations and Evolution · Quantitative Biology 2023-11-27 Jacob Curran-Sebastian , Lorenzo Pellis , Ian Hall , Thomas House

In this paper, we propose a mathematical framework that governs the evolution of epidemic dynamics, encompassing both intra-population dynamics and inter-population mobility within a metapopulation network. By linearizing this dynamical…

Physics and Society · Physics 2025-05-05 Yazdan Babazadeh , Amin Safaeesirat , Fakhteh Ghanbarnejad

Consider a fully connected network of nodes, some of which have a piece of data to be disseminated to the whole network. We analyze the following push-type epidemic algorithm: in each push round, every node that has the data, i.e., every…

Probability · Mathematics 2014-03-12 Mine Caglar , Ali Devin Sezer

We study the problem of identifying infection sources in a network based on the network topology, and a subset of infection timestamps. In the case of a single infection source in a tree network, we derive the maximum likelihood estimator…

Social and Information Networks · Computer Science 2019-03-06 Wenchang Tang , Feng Ji , Wee Peng Tay

To control infection spreading on networks, we investigate the effect of observer nodes that recognize infection in a neighboring node and make the rest of the neighbor nodes immune. We numerically show that random placement of observer…

Physics and Society · Physics 2014-07-15 Taro Takaguchi , Takehisa Hasegawa , Yuichi Yoshida

Early detection and modeling of a contagious epidemic can provide important guidance about quelling the contagion, controlling its spread, or the effective design of countermeasures. A topic of recent interest has been to design social…

Social and Information Networks · Computer Science 2016-03-09 Huijuan Shao , K. S. M. Tozammel Hossain , Hao Wu , Maleq Khan , Anil Vullikanti , B. Aditya Prakash , Madhav Marathe , Naren Ramakrishnan

We study the problem of estimating the origin of an epidemic outbreak -- given a contact network and a snapshot of epidemic spread at a certain time, determine the infection source. Finding the source is important in different contexts of…

Physics and Society · Physics 2014-11-20 Andrey Y. Lokhov , Marc Mézard , Hiroki Ohta , Lenka Zdeborová

We study the effect of the connectivity pattern of complex networks on the propagation dynamics of epidemics. The growth time scale of outbreaks is inversely proportional to the network degree fluctuations, signaling that epidemics spread…

Disordered Systems and Neural Networks · Physics 2009-11-10 Marc Barthelemy , Alain Barrat , Romualdo Pastor-Satorras , Alessandro Vespignani
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