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Functional Spectral Imaging (FSI) models image formation as the recovery of tissue surrogates such as density and stiffness from spectral perturbations of a self-adjoint elliptic operator. Rather than relying on reflectivity or relaxation…

Medical Physics · Physics 2025-10-21 Cesar Mello Fernando Medina da Cunha

Recent advancements in finite element methods allows for the implementation of mesh cells with curved edges. In the present work, we develop the tools necessary to employ multiply connected mesh cells, i.e. cells with holes, in planar…

Numerical Analysis · Mathematics 2023-03-15 Jeffrey S. Ovall , Samuel E. Reynolds

A model and code (TIFF) for isothermal gyrofluid computation of quasi-two-dimensional interchange and drift wave turbulence in magnetized plasmas with arbitrary fluctuation amplitudes (full-f) and arbitrary polarization wavelengths (full-k)…

Plasma Physics · Physics 2023-06-13 Alexander Kendl

This paper presents a recently developed particle simulation code package PIFE-PIC, which is a novel three-dimensional (3-D) Parallel Immersed-Finite-Element (IFE) Particle-in-Cell (PIC) simulation model for particle simulations of…

Mathematical Software · Computer Science 2020-11-23 Daoru Han , Xiaoming He , David Lund , Xu Zhang

We present a new parallel spectral element solver, FNPF-SEM, for simulating linear and fully nonlinear potential flow-based water waves and their interaction with offshore structures. The tool is designed as a general-purpose wave model for…

Numerical Analysis · Mathematics 2025-06-12 Jens Visbech , Anders Melander , Allan Peter Engsig-Karup

The implicit 2D3V particle-in-cell (PIC) code developed to study the interaction of ultrashort pulse lasers with matter [G. M. Petrov and J. Davis, Computer Phys. Comm. 179, 868 (2008); Phys. Plasmas 18, 073102 (2011)] has been parallelized…

Plasma Physics · Physics 2016-08-24 George M. Petrov , Jack Davis

This paper deals with the modelling of superconducting and resistive wires with a helicoidal symmetry, subjected to an external field and a transport current. Helicoidal structures are three-dimensional, and therefore yield computationally…

We present a simulation experiment of a pipeline based on machine learning algorithms for neutral hydrogen (HI) intensity mapping (IM) surveys with different telescopes. The simulation is conducted on HI signals, foreground emission,…

Instrumentation and Methods for Astrophysics · Physics 2022-09-14 Lin-Cheng Li , Yuan-Gen Wang

Neural preconditioners for real-time physics simulation offer promising data-driven priors, but they often fail to capture long-range couplings efficiently because they inherit local message passing or sparse-operator access patterns. We…

Graphics · Computer Science 2026-05-15 Carl Osborne , Minghao Guo , Crystal Owens , Wojciech Matusik

Learning the manifold structure of remote sensing images is of paramount relevance for modeling and understanding processes, as well as to encapsulate the high dimensionality in a reduced set of informative features for subsequent…

Computer Vision and Pattern Recognition · Computer Science 2022-05-04 Gulsen Taskin , Gustau Camps-Valls

Interatomic potentials (IPs) are reduced-order models for calculating the potential energy of a system of atoms given their positions in space and species. IPs treat atoms as classical particles without explicitly modeling electrons and…

Materials Science · Physics 2024-05-07 Mingjian Wen , Yaser Afshar , Ryan S. Elliott , Ellad B. Tadmor

It has been noted that the traditional scaling argument cannot be directly applied to the error analysis of immersed finite elements (IFE) because, in general, the spaces on the reference element associated with the IFE spaces on different…

Numerical Analysis · Mathematics 2024-11-13 Slimane Adjerid , Tao Lin , Haroun Meghaichi

Fourier Transform Interferometry (FTI) is an interferometric procedure for acquiring HyperSpectral (HS) data. Recently, it has been observed that the light source highlighting a (biologic) sample can be coded before the FTI acquisition in a…

Information Theory · Computer Science 2018-03-09 Amirafshar Moshtaghpour , Laurent Jacques

The quasi-neutral hybrid model with kinetic ions and fluid electrons is a promising approach for bridging the inherent multi-scale nature of many problems in space and laboratory plasmas. Here, a novel, implicit, particle-in-cell based…

Plasma Physics · Physics 2018-11-14 A. Stanier , L. Chacón , G. Chen

In this work, a method for the simulation of guided wave propagation in solids defined by implicit surfaces is presented. The method employs structured grids of spectral elements in combination to a fictitious domain approach to represent…

Computational Engineering, Finance, and Science · Computer Science 2022-07-08 Sergio Nicoli , Konstantinos Agathos , Eleni Chatzi

Spectral submanifolds (SSMs) have emerged as accurate and predictive model reduction tools for dynamical systems defined either by equations or data sets. While finite-elements (FE) models belong to the equation-based class of problems,…

Dynamical Systems · Mathematics 2024-12-18 Mattia Cenedese , Jacopo Marconi , George Haller , Shobhit Jain

Multispectral and Hyperspectral Image Fusion (MHIF) is a practical task that aims to fuse a high-resolution multispectral image (HR-MSI) and a low-resolution hyperspectral image (LR-HSI) of the same scene to obtain a high-resolution…

Computer Vision and Pattern Recognition · Computer Science 2023-10-31 ShangQi Deng , RuoCheng Wu , Liang-Jian Deng , Ran Ran , Gemine Vivone

HfS is a tool to fit the hyperfine structure of spectral lines, with multiple velocity components. The HfS_nh3 procedures included in HfS fit simultaneously the hyperfine structure of the NH$_3$ (J,K)= (1,1) and (2,2) transitions, and…

Instrumentation and Methods for Astrophysics · Physics 2017-01-18 Robert Estalella

This paper describes a new code for simulating astrophysical plasmas that solves a hybrid model composed of gyrokinetic ions (GKI) and an isothermal electron fluid (ITEF) [A. Schekochihin et al., Astrophys. J. Suppl. \textbf{182}, 310…

Plasma Physics · Physics 2018-02-05 Y. Kawazura , M. Barnes

The magnetohydrodynamics (MHD) equations are continuum models used in the study of a wide range of plasma physics systems, including the evolution of complex plasma dynamics in tokamak disruptions. However, efficient numerical solution…

Computational Physics · Physics 2022-02-09 Qi Tang , Luis Chacon , Tzanio V. Kolev , John N. Shadid , Xian-Zhu Tang
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