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Most graph kernels are an instance of the class of $\mathcal{R}$-Convolution kernels, which measure the similarity of objects by comparing their substructures. Despite their empirical success, most graph kernels use a naive aggregation of…

Machine Learning · Computer Science 2019-10-31 Matteo Togninalli , Elisabetta Ghisu , Felipe Llinares-López , Bastian Rieck , Karsten Borgwardt

We prove that for every class of graphs $\mathcal{C}$ which is nowhere dense, as defined by Nesetril and Ossona de Mendez, and for every first order formula $\phi(\bar x,\bar y)$, whenever one draws a graph $G\in \mathcal{C}$ and a subset…

Discrete Mathematics · Computer Science 2017-11-07 Michał Pilipczuk , Sebastian Siebertz , Szymon Toruńczyk

A total dominating set of a graph $G=(V,E)$ is a subset $D \subseteq V$ such that every vertex in $V$ is adjacent to some vertex in $D$. Finding a total dominating set of minimum size is NP-hard on planar graphs and W[2]-complete on general…

Data Structures and Algorithms · Computer Science 2023-06-22 Valentin Garnero , Ignasi Sau

For the past 30 years or so, machine learning has stimulated a great deal of research in the study of approximation capabilities (expressive power) of a multitude of processes, such as approximation by shallow or deep neural networks,…

Machine Learning · Computer Science 2025-01-07 Hrushikesh Mhaskar

We study homomorphism polynomials, which are polynomials that enumerate all homomorphisms from a pattern graph $H$ to $n$-vertex graphs. These polynomials have received a lot of attention recently for their crucial role in several new…

Computational Complexity · Computer Science 2020-11-17 Balagopal Komarath , Anurag Pandey , C. S. Rahul

This work analyzes Graph Neural Networks, a generalization of Fully-Connected Deep Neural Nets on Graph structured data, when their width, that is the number of nodes in each fullyconnected layer is increasing to infinity. Infinite Width…

Machine Learning · Computer Science 2023-11-21 Yunus Cobanoglu

A set is called r-independent, if every two vertices of it are in distance greater then r. In the r-independent set problem with parameter k, we ask whether in a given graph G there exists an r-independent set of size k. In this work we…

Data Structures and Algorithms · Computer Science 2019-12-03 Grzegorz Fabiański

We consider the problem of partitioning a graph into a non-fixed number of non-overlapping subgraphs of maximum density. The density of a partition is the sum of the densities of the subgraphs, where the density of a subgraph is its average…

Computational Complexity · Computer Science 2022-02-17 Cristina Bazgan , Katrin Casel , Pierre Cazals

The CONNECTED VERTEX COVER problem asks for a vertex cover in a graph that induces a connected subgraph. The problem is known to be fixed-parameter tractable (FPT), and is unlikely to have a polynomial sized kernel (under complexity…

Data Structures and Algorithms · Computer Science 2018-10-08 R. Krithika , Diptapriyo Majumdar , Venkatesh Raman

Constructing a similarity graph from a set $X$ of data points in $\mathbb{R}^d$ is the first step of many modern clustering algorithms. However, typical constructions of a similarity graph have high time complexity, and a quadratic space…

Data Structures and Algorithms · Computer Science 2023-10-24 Peter Macgregor , He Sun

This paper introduces a novel approach to probabilistic deep learning, kernel density matrices, which provide a simpler yet effective mechanism for representing joint probability distributions of both continuous and discrete random…

Machine Learning · Computer Science 2024-05-01 Fabio A. González , Raúl Ramos-Pollán , Joseph A. Gallego-Mejia

A graph is distance-hereditary if for any pair of vertices, their distance in every connected induced subgraph containing both vertices is the same as their distance in the original graph. The Distance-Hereditary Vertex Deletion problem…

Data Structures and Algorithms · Computer Science 2017-02-22 Eun Jung Kim , O-joung Kwon

An $\alpha$-approximate polynomial Turing kernelization is a polynomial-time algorithm that computes an $(\alpha c)$-approximate solution for a parameterized optimization problem when given access to an oracle that can compute…

Data Structures and Algorithms · Computer Science 2023-07-06 Stefan Kratsch , Pascal Kunz

Several algorithmic meta-theorems on kernelization have appeared in the last years, starting with the result of Bodlaender et al. [FOCS 2009] on graphs of bounded genus, then generalized by Fomin et al. [SODA 2010] to graphs excluding a…

Data Structures and Algorithms · Computer Science 2014-11-21 Valentin Garnero , Christophe Paul , Ignasi Sau , Dimitrios M. Thilikos

Deciding whether a graph can be embedded in a grid using only unit-length edges is NP-complete, even when restricted to binary trees. However, it is not difficult to devise a number of graph classes for which the problem is polynomial, even…

Data Structures and Algorithms · Computer Science 2012-04-13 Vinícius G. P. de Sá , Guilherme D. da Fonseca , Raphael Machado , Celina M. H. de Figueiredo

Subgraph isomorphism counting is known as #P-complete and requires exponential time to find the accurate solution. Utilizing representation learning has been shown as a promising direction to represent substructures and approximate the…

Machine Learning · Computer Science 2024-05-14 Xin Liu , Weiqi Wang , Jiaxin Bai , Yangqiu Song

Let F be a finite set of graphs. In the F-Deletion problem, we are given an n-vertex graph G and an integer k as input, and asked whether at most k vertices can be deleted from G such that the resulting graph does not contain a graph from F…

Data Structures and Algorithms · Computer Science 2020-11-03 Fedor Fomin , Daniel Lokshtanov , Neeldhara Misra , Saket Saurabh

We study the kernelization complexity of structural parameterizations of the Vertex Cover problem. Here, the goal is to find a polynomial-time preprocessing algorithm that can reduce any instance $(G,k)$ of the Vertex Cover problem to an…

Data Structures and Algorithms · Computer Science 2023-07-25 Marin Bougeret , Bart M. P. Jansen , Ignasi Sau

Recently, Bollob\'as, Janson and Riordan introduced a very general family of random graph models, producing inhomogeneous random graphs with $\Theta(n)$ edges. Roughly speaking, there is one model for each {\em kernel}, i.e., each symmetric…

Combinatorics · Mathematics 2010-06-29 B. Bollobas , O. Riordan

This work proposes a framework LGKDE that learns kernel density estimation for graphs. The key challenge in graph density estimation lies in effectively capturing both structural patterns and semantic variations while maintaining…

Machine Learning · Computer Science 2026-05-27 Xudong Wang , Ziheng Sun , Chris Ding , Jicong Fan