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In this paper, we propose a computational framework for 3D volume reconstruction from 2D histological slices using registration algorithms in feature space. To improve the quality of reconstructed 3D volume, first, intensity variations in…

Computer Vision and Pattern Recognition · Computer Science 2009-07-21 Ulas Bagci , Li Bai

We describe a fully-automatic 3D-segmentation technique for brain MR images. Using Markov random fields the segmentation algorithm captures three important MR features, i.e. non-parametric distributions of tissue intensities, neighborhood…

Computer Vision and Pattern Recognition · Computer Science 2009-03-20 Karsten Held , Elena Rota Kops , Bernd J. Krause , William M. Wells , Ron Kikinis , Hans-Wilhelm Mueller-Gaertner

Magnetic Resonance Fingerprinting (MRF) is an emerging technology with the potential to revolutionize radiology and medical diagnostics. In comparison to traditional magnetic resonance imaging (MRI), MRF enables the rapid, simultaneous,…

Medical image segmentation is one of the important tasks of computer-aided diagnosis in medical image analysis. Since most medical images have the characteristics of blurred boundaries and uneven intensity distribution, through existing…

Computer Vision and Pattern Recognition · Computer Science 2021-06-09 Sixing Yin , Yameng Han , Shufang Li

In this paper, we propose a novel non-iterative algorithm to simultaneously estimate optimal rigid transformation for serial section images, which is a key component in volume reconstruction of serial sections of biological tissue. In order…

Computer Vision and Pattern Recognition · Computer Science 2020-05-12 Chang Shu , Xi Chen , Qiwei Xie , Chi Xiao , Hua Han

The field of medical image segmentation is challenged by domain generalization (DG) due to domain shifts in clinical datasets. The DG challenge is exacerbated by the scarcity of medical data and privacy concerns. Traditional single-source…

Computer Vision and Pattern Recognition · Computer Science 2024-09-10 Qiang Qiao , Wenyu Wang , Meixia Qu , Kun Su , Bin Jiang , Qiang Guo

The task of image restration is to find the spatial correspondence of two or more given images. In this paper we assume that the correspondence is given either by an Euclidean, or by an affine volume-preserving transformation. Since the…

Optimization and Control · Mathematics 2010-07-30 Martin Schröter , Uwe Helmke , Otto Sauer

Labelling data is expensive and time consuming especially for domains such as medical imaging that contain volumetric imaging data and require expert knowledge. Exploiting a larger pool of labeled data available across multiple centers,…

Computer Vision and Pattern Recognition · Computer Science 2020-09-03 Daiqing Li , Amlan Kar , Nishant Ravikumar , Alejandro F Frangi , Sanja Fidler

Large electron microscopy image datasets for connectomics are typically composed of thousands to millions of partially overlapping two-dimensional images (tiles), which must be registered into a coherent volume prior to further analysis. A…

Computer Vision and Pattern Recognition · Computer Science 2018-04-27 Khaled Khairy , Gennady Denisov , Stephan Saalfeld

Simultaneous multislice (SMS) imaging is a one of the acceleration technique of magnetic resonance imaging. SMS requires accurate sensitivity distributions in the slice plane for each receiving coil. This requirement is difficult to satisfy…

Medical Physics · Physics 2024-03-04 Satoshi Ito , Yuki Sato , Naoya Endo , Shohei Ouchi

Automated cardiac segmentation from magnetic resonance imaging datasets is an essential step in the timely diagnosis and management of cardiac pathologies. We propose to tackle the problem of automated left and right ventricle segmentation…

Computer Vision and Pattern Recognition · Computer Science 2017-04-28 Phi Vu Tran

In image processing, image segmentation is the process of partitioning a digital image into multiple image segment. Among state-of-the-art methods, Markov Random Fields (MRF) can be used to model dependencies between pixels, and achieve a…

Emerging Technologies · Computer Science 2024-01-05 Timothe Presles , Cyrille Enderli , Gilles Burel , El Houssain Baghious

We propose a fluid-based registration framework of medical images based on implicit neural representation. By integrating implicit neural representation and Large Deformable Diffeomorphic Metric Mapping (LDDMM), we employ a Multilayer…

Image and Video Processing · Electrical Eng. & Systems 2023-11-28 Chulong Zhang , Xiaokun Liang

The importance of imaging exams, such as Magnetic Resonance Imaging (MRI), for the diagnostic and follow-up of pediatric pathologies and the assessment of anatomical structures' development has been increasingly highlighted in recent times.…

Computer Vision and Pattern Recognition · Computer Science 2019-08-05 Larissa de O. Penteado , Mateus Riva , Roberto M. Cesar

Magnetic Resonance Imaging (MRI) has evolved as a clinical standard-of-care imaging modality for cardiac morphology, function assessment, and guidance of cardiac interventions. All these applications rely on accurate extraction of the…

Computer Vision and Pattern Recognition · Computer Science 2016-11-07 Shusil Dangi , Nathan Cahill , Cristian A. Linte

Magnetic resonance imaging (MRI) enables 3-D imaging of anatomical structures. However, the acquisition of MR volumes with high spatial resolution leads to long scan times. To this end, we propose volumetric super-resolution forests (VSRF)…

Computer Vision and Pattern Recognition · Computer Science 2018-02-16 Aline Sindel , Katharina Breininger , Johannes Käßer , Andreas Hess , Andreas Maier , Thomas Köhler

Deformable registration consists of finding the best dense correspondence between two different images. Many algorithms have been published, but the clinical application was made difficult by the high calculation time needed to solve the…

Computer Vision and Pattern Recognition · Computer Science 2021-11-25 Théo Estienne , Maria Vakalopoulou , Enzo Battistella , Theophraste Henry , Marvin Lerousseau , Amaury Leroy , Nikos Paragios , Eric Deutsch

Superresolution theory and techniques seek to recover signals from samples in the presence of blur and noise. Discrete image registration can be an approach to fuse information from different sets of samples of the same signal. Quantization…

Computer Vision and Pattern Recognition · Computer Science 2024-12-16 Serap A. Savari

Wound care is often challenged by the economic and logistical burdens that consistently afflict patients and hospitals worldwide. In recent decades, healthcare professionals have sought support from computer vision and machine learning…

Computer Vision and Pattern Recognition · Computer Science 2026-01-26 Remi Chierchia , Léo Lebrat , David Ahmedt-Aristizabal , Yulia Arzhaeva , Olivier Salvado , Clinton Fookes , Rodrigo Santa Cruz

The exponential growth of medical imaging has created significant challenges in data storage, transmission, and management for healthcare systems. In this vein, efficient compression becomes increasingly important. Unlike natural image…

Image and Video Processing · Electrical Eng. & Systems 2026-02-10 Guofeng Tong , Sixuan Liu , Yang Lv , Hanyu Pei , Feng-Lei Fan