English
Related papers

Related papers: Boosting Docking-based Virtual Screening with Deep…

200 papers

We propose a novel semantic segmentation algorithm by learning a deconvolution network. We learn the network on top of the convolutional layers adopted from VGG 16-layer net. The deconvolution network is composed of deconvolution and…

Computer Vision and Pattern Recognition · Computer Science 2015-05-19 Hyeonwoo Noh , Seunghoon Hong , Bohyung Han

There has recently been great progress in automatic segmentation of medical images with deep learning algorithms. In most works observer variation is acknowledged to be a problem as it makes training data heterogeneous but so far no…

Computer Vision and Pattern Recognition · Computer Science 2020-01-24 Arkadiy Dushatskiy , Adriënne M. Mendrik , Peter A. N. Bosman , Tanja Alderliesten

Molecular docking, a technique for predicting ligand binding poses, is crucial in structure-based drug design for understanding protein-ligand interactions. Recent advancements in docking methods, particularly those leveraging geometric…

Biomolecules · Quantitative Biology 2024-10-17 Jiaxian Yan , Zaixi Zhang , Jintao Zhu , Kai Zhang , Jianfeng Pei , Qi Liu

Visual object tracking remains an active research field in computer vision due to persisting challenges with various problem-specific factors in real-world scenes. Many existing tracking methods based on discriminative correlation filters…

Computer Vision and Pattern Recognition · Computer Science 2021-09-21 Seyed Mojtaba Marvasti-Zadeh , Hossein Ghanei-Yakhdan , Shohreh Kasaei , Kamal Nasrollahi , Thomas B. Moeslund

This paper introduces a novel deep learning based approach for vision based single target tracking. We address this problem by proposing a network architecture which takes the input video frames and directly computes the tracking score for…

Computer Vision and Pattern Recognition · Computer Science 2016-07-12 Mengyao Zhai , Mehrsan Javan Roshtkhari , Greg Mori

Although deep convolutional neural network has been proved to efficiently eliminate coding artifacts caused by the coarse quantization of traditional codec, it's difficult to train any neural network in front of the encoder for gradient's…

Computer Vision and Pattern Recognition · Computer Science 2018-01-17 Lijun Zhao , Huihui Bai , Anhong Wang , Yao Zhao

Deep convolutional neural networks (DCNNs) trained on a large number of images with strong pixel-level annotations have recently significantly pushed the state-of-art in semantic image segmentation. We study the more challenging problem of…

Computer Vision and Pattern Recognition · Computer Science 2015-10-07 George Papandreou , Liang-Chieh Chen , Kevin Murphy , Alan L. Yuille

Cervical cancer is highly preventable, yet persistent barriers to screening limit progress toward elimination goals. Speculum-free devices that integrate imaging and sampling could improve access, particularly in low-resource settings, but…

Artificial Neural Networks (ANN) have been popularized in many science and technological areas due to their capacity to solve many complex pattern matching problems. That is the case of Virtual Screening, a research area that studies how to…

Neural and Evolutionary Computing · Computer Science 2020-06-05 Christian F. Frasser , Carola de Benito , Vincent Canals , Miquel Roca , Pedro J. Ballester , Josep L. Rossello

Learning effective feature crosses is the key behind building recommender systems. However, the sparse and large feature space requires exhaustive search to identify effective crosses. Deep & Cross Network (DCN) was proposed to…

Information Retrieval · Computer Science 2021-06-11 Ruoxi Wang , Rakesh Shivanna , Derek Z. Cheng , Sagar Jain , Dong Lin , Lichan Hong , Ed H. Chi

In intra coding, Rate Distortion Optimization (RDO) is performed to achieve the optimal intra mode from a pre-defined candidate list. The optimal intra mode is also required to be encoded and transmitted to the decoder side besides the…

Image and Video Processing · Electrical Eng. & Systems 2022-04-11 Linwei Zhu , Yun Zhang , Na Li , Gangyi Jiang , Sam Kwong

Deep neural networks have recently drawn considerable attention to build and evaluate artificial learning models for perceptual tasks. Here, we present a study on the performance of the deep learning models to deal with global optimization…

Neural and Evolutionary Computing · Computer Science 2020-12-18 Hojjat Rakhshani , Lhassane Idoumghar , Soheila Ghambari , Julien Lepagnot , Mathieu Brévilliers

Structure-based virtual screening (SBVS) is a key workflow in computational drug discovery. SBVS models are assessed by measuring the enrichment of known active molecules over decoys in retrospective screens. However, the standard formula…

Quantitative Methods · Quantitative Biology 2024-03-18 Michael Brocidiacono , Konstantin I. Popov , Alexander Tropsha

Deep networks have been successfully applied to visual tracking by learning a generic representation offline from numerous training images. However the offline training is time-consuming and the learned generic representation may be less…

Computer Vision and Pattern Recognition · Computer Science 2015-08-25 Kaihua Zhang , Qingshan Liu , Yi Wu , Ming-Hsuan Yang

Robot warehouse automation has attracted significant interest in recent years, perhaps most visibly in the Amazon Picking Challenge (APC). A fully autonomous warehouse pick-and-place system requires robust vision that reliably recognizes…

Computer Vision and Pattern Recognition · Computer Science 2017-05-09 Andy Zeng , Kuan-Ting Yu , Shuran Song , Daniel Suo , Ed Walker , Alberto Rodriguez , Jianxiong Xiao

With the representation learning capability of the deep learning models, deep embedded multi-view clustering (MVC) achieves impressive performance in many scenarios and has become increasingly popular in recent years. Although great…

Machine Learning · Computer Science 2022-05-10 Zongmo Huang , Yazhou Ren , Xiaorong Pu , Lifang He

Purpose: To develop and evaluate the accuracy of a multi-view deep learning approach to the analysis of high-resolution synthetic mammograms from digital breast tomosynthesis screening cases, and to assess the effect on accuracy of image…

Image and Video Processing · Electrical Eng. & Systems 2020-09-29 Saeed Seyyedi , Margaret J. Wong , Debra M. Ikeda , Curtis P. Langlotz

Deep Neural Network(DNN) techniques have been prevalent in software engineering. They are employed to faciliatate various software engineering tasks and embedded into many software applications. However, analyzing and understanding their…

Software Engineering · Computer Science 2019-06-04 Xufan Zhang , Ziyue Yin , Yang Feng , Qingkai Shi , Jia Liu , Zhenyu Chen

Existing object proposal approaches use primarily bottom-up cues to rank proposals, while we believe that objectness is in fact a high level construct. We argue for a data-driven, semantic approach for ranking object proposals. Our…

Computer Vision and Pattern Recognition · Computer Science 2015-09-29 Weicheng Kuo , Bharath Hariharan , Jitendra Malik

Typical Magnetic Resonance Imaging (MRI) scan may take 20 to 60 minutes. Reducing MRI scan time is beneficial for both patient experience and cost considerations. Accelerated MRI scan may be achieved by acquiring less amount of k-space data…

Image and Video Processing · Electrical Eng. & Systems 2020-01-15 Pak Lun Kevin Ding , Zhiqiang Li , Yuxiang Zhou , Baoxin Li