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In this article we present theoretical and computational results on the existence of polyhedral embeddings of graphs. The emphasis is on cubic graphs. We also describe an efficient algorithm to compute all polyhedral embeddings of a given…

Combinatorics · Mathematics 2023-06-22 Gunnar Brinkmann , Thomas Tucker , Nico Van Cleemput

In this survey we overview known results and get several new results on digraph compositions which generalize several classes of digraphs, such as quasi-transitive digraphs. After an introductory section, the paper is divided into six…

Combinatorics · Mathematics 2023-06-16 Yuefang Sun

Graphs are ubiquitous in encoding relational information of real-world objects in many domains. Graph generation, whose purpose is to generate new graphs from a distribution similar to the observed graphs, has received increasing attention…

Machine Learning · Computer Science 2022-12-08 Yanqiao Zhu , Yuanqi Du , Yinkai Wang , Yichen Xu , Jieyu Zhang , Qiang Liu , Shu Wu

In this paper, we introduce a generalization of graphlets to heterogeneous networks called typed graphlets. Informally, typed graphlets are small typed induced subgraphs. Typed graphlets generalize graphlets to rich heterogeneous networks…

Social and Information Networks · Computer Science 2020-10-28 Ryan A. Rossi , Nesreen K. Ahmed , Aldo Carranza , David Arbour , Anup Rao , Sungchul Kim , Eunyee Koh

Let d_i(G) be the density of the 3-vertex i-edge graph in a graph G, i.e., the probability that three random vertices induce a subgraph with i edges. Let S be the set of all quadruples (d_0,d_1,d_2,d_3) that are arbitrary close to 3-vertex…

Combinatorics · Mathematics 2017-04-12 Roman Glebov , Andrzej Grzesik , Ping Hu , Tamas Hubai , Daniel Kral , Jan Volec

Network embedding, which aims to learn low-dimensional representations of nodes, has been used for various graph related tasks including visualization, link prediction and node classification. Most existing embedding methods rely solely on…

Social and Information Networks · Computer Science 2019-08-22 Palash Goyal , Homa Hosseinmardi , Emilio Ferrara , Aram Galstyan

Computers and algorithms play an ever-increasing role in obtaining new results in graph theory. In this survey, we present a broad range of techniques used in computer-assisted graph theory, including the exhaustive generation of all…

Combinatorics · Mathematics 2025-08-29 Jorik Jooken

Neural networks that process the parameters of other neural networks find applications in domains as diverse as classifying implicit neural representations, generating neural network weights, and predicting generalization errors. However,…

A graph is $n$-e.c. ($n$-existentially closed) if for every pair of subsets $A, B$ of vertex set $V$ of the graph such that $A \cap B = \emptyset$ and $|A| + |B| = n$, there is a vertex $z$ not in $A \cup B$ joined to each vertex of $A$ and…

Combinatorics · Mathematics 2009-03-17 Le Anh Vinh

Recent years have witnessed the emerging success of graph neural networks (GNNs) for modeling structured data. However, most GNNs are designed for homogeneous graphs, in which all nodes and edges belong to the same types, making them…

Machine Learning · Computer Science 2020-03-04 Ziniu Hu , Yuxiao Dong , Kuansan Wang , Yizhou Sun

Current graph neural networks (GNNs) that tackle node classification on graphs tend to only focus on nodewise scores and are solely evaluated by nodewise metrics. This limits uncertainty estimation on graphs since nodewise marginals do not…

Machine Learning · Computer Science 2022-10-28 Hans Hao-Hsun Hsu , Yuesong Shen , Daniel Cremers

How do vertices exert influence in graph data? We develop a framework for edge clustering, a new method for exploratory data analysis that reveals how both vertices and edges collaboratively accomplish directed influence in graphs,…

Social and Information Networks · Computer Science 2022-02-25 Manohar Murthi , Kamal Premaratne

Recently, so-called treebased phylogenetic networks have gained considerable interest in the literature, where a treebased network is a network that can be constructed from a phylogenetic tree, called the base tree, by adding additional…

Populations and Evolution · Quantitative Biology 2019-11-28 Mareike Fischer , Michelle Galla , Lina Herbst , Yangjing Long , Kristina Wicke

IC-planar graphs are those graphs that admit a drawing where no two crossed edges share an end-vertex and each edge is crossed at most once. They are a proper subfamily of the 1-planar graphs. Given an embedded IC-planar graph $G$ with $n$…

Computational Geometry · Computer Science 2016-07-19 Franz J. Brandenburg , Walter Didimo , William S. Evans , Philipp Kindermann , Giuseppe Liotta , Fabrizio Montecchiani

Graph embedding based on random-walks supports effective solutions for many graph-related downstream tasks. However, the abundance of embedding literature has made it increasingly difficult to compare existing methods and to identify…

Machine Learning · Computer Science 2021-10-26 Zexi Huang , Arlei Silva , Ambuj Singh

We study 3-plane drawings, that is, drawings of graphs in which every edge has at most three crossings. We show how the recently developed Density Formula for topological drawings of graphs (KKKRSU GD 2024) can be used to count the…

Combinatorics · Mathematics 2025-03-12 Miriam Goetze , Michael Hoffmann , Ignaz Rutter , Torsten Ueckerdt

A graph is a structure composed of a set of vertices (i.e.nodes, dots) connected to one another by a set of edges (i.e.links, lines). The concept of a graph has been around since the late 19$^\text{th}$ century, however, only in recent…

Data Structures and Algorithms · Computer Science 2010-12-24 Marko A. Rodriguez , Peter Neubauer

This paper proposes an efficient method to construct the bipartite graph with as many edges as possible while without introducing the shortest cycles of length equal to 4. The binary matrix associated with the bipartite graph described…

Information Theory · Computer Science 2014-04-22 Weizhi Lu , Kidiyo Kpalma , Joseph Ronsin

For a graph $\mathbb{Q}=(\mathbb{V},\mathbb{E})$, the transformation graphs are defined as graphs with vertex set being $\mathbb{V(Q)} \cup \mathbb{E(Q)}$ and edge set is described following certain conditions. In comparison to the…

Discrete Mathematics · Computer Science 2024-10-15 Parvez Ali , Annmaria Baby , D. Antony Xavier , Theertha Nair A , Haidar Ali , Syed Ajaz K. Kirmani

A graph of order $n$ is distance magic if it admits a bijective labeling of its vertices with integers from $1$ to $n$ such that each vertex has the same sum of the labels of its neighbors. This paper contributes to the long term project of…

Combinatorics · Mathematics 2025-08-12 Ksenija Rozman , Primož Šparl