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When analysing gene expression time series data an often overlooked but crucial aspect of the model is that the regulatory network structure may change over time. Whilst some approaches have addressed this problem previously in the…

Molecular Networks · Quantitative Biology 2012-03-05 Thomas Thorne , Michael P. H Stumpf

Statistical mechanics is applied to lossy compression using multilayer perceptrons for unbiased Boolean messages. We utilize a tree-like committee machine (committee tree) and tree-like parity machine (parity tree) whose transfer functions…

Statistical Mechanics · Physics 2007-05-23 Kazushi Mimura , Masato Okada

By capturing the anisotropic water diffusion in tissue, diffusion magnetic resonance imaging (dMRI) provides a unique tool for noninvasively probing the tissue microstructure and orientation in the human brain. The diffusion profile can be…

Computer Vision and Pattern Recognition · Computer Science 2017-06-21 Chuyang Ye

We present a novel prior for tree topology within Bayesian Additive Regression Trees (BART) models. This approach quantifies the hypothetical loss in information and the loss due to complexity associated with choosing the wrong tree…

Methodology · Statistics 2024-12-30 F. Serafini , F. Leisen , C. Villa , K. Wilson

We consider the problem of distributed lossy linear function computation in a tree network. We examine two cases: (i) data aggregation (only one sink node computes) and (ii) consensus (all nodes compute the same function). By quantifying…

Information Theory · Computer Science 2017-01-16 Yaoqing Yang , Pulkit Grover , Soummya Kar

We study the spectrum of the Markov matrix of the totally asymmetric exclusion process (TASEP) on a one-dimensional periodic lattice at ARBITRARY filling. Although the system does not possess obvious symmetries except translation…

Statistical Mechanics · Physics 2009-11-10 O. Golinelli , K. Mallick

Efficient feature selection from high-dimensional datasets is a very important challenge in many data-driven fields of science and engineering. We introduce a statistical mechanics inspired strategy that addresses the problem of sparse…

Machine Learning · Statistics 2021-04-07 Alfredo Braunstein , Thomas Gueudré , Andrea Pagnani , Mirko Pieropan

Ensembling is now recognized as an effective approach for increasing the predictive performance and calibration of deep networks. We introduce a new approach, Parameter Ensembling by Perturbation (PEP), that constructs an ensemble of…

Machine Learning · Computer Science 2020-10-27 Alireza Mehrtash , Purang Abolmaesumi , Polina Golland , Tina Kapur , Demian Wassermann , William M. Wells

In cellular network models, the base stations are usually assumed to form a lattice or a Poisson point process (PPP). In reality, however, they are deployed neither fully regularly nor completely randomly. Accordingly, in this paper, we…

Information Theory · Computer Science 2014-04-29 Anjin Guo , Martin Haenggi

A new modelling approach for the analysis of weighted networks with ordinal/polytomous dyadic values is introduced. Specifically, it is proposed to model the weighted network connectivity structure using a hierarchical multilayer…

Methodology · Statistics 2019-08-05 Alberto Caimo , Isabella Gollini

For fitness preferential attachment random networks, we define the empirical degree and pair measure, which counts the number of vertices of a given degree and the number of edges with given fits, and the sample path empirical degree…

Information Theory · Computer Science 2014-06-13 K. Doku-Amponsah , F. O. Mettle , T. Narh-Ansah

Estimating the dissipation, or the entropy production rate (EPR), can provide insights into the underlying mechanisms of nonequilibrium driven processes. Experimentally, however, only partial information can be accessed, and the ability to…

Statistical Mechanics · Physics 2022-12-29 Uri Kapustin , Aishani Ghosal , Gili Bisker

It is becoming increasingly common to see large collections of network data objects -- that is, data sets in which a network is viewed as a fundamental unit of observation. As a result, there is a pressing need to develop network-based…

Statistics Theory · Mathematics 2019-02-08 Eric Kolaczyk , Lizhen Lin , Steven Rosenberg , Jie Xu , Jackson Walters

Asymptotic properties of a vector of length power functionals of random geometric graphs are investigated. More precisely, its asymptotic covariance matrix is studied as the intensity of the underlying homogeneous Poisson point process…

Probability · Mathematics 2022-07-13 Matthias Reitzner , Tim Römer , Mandala von Westenholz

We present a general holistic theory for the organization of complex networks, both human-engineered and naturally-evolved. Introducing concepts of value of interactions and satisfaction as generic network performance measures, we show that…

Adaptation and Self-Organizing Systems · Physics 2007-07-13 Venkat Venkatasubramanian , Dimitris N. Politis , Priyan R. Patkar

Latent variable models for network data extract a summary of the relational structure underlying an observed network. The simplest possible models subdivide nodes of the network into clusters; the probability of a link between any two nodes…

Machine Learning · Computer Science 2012-07-03 Konstantina Palla , David Knowles , Zoubin Ghahramani

We present two statistical causes for the distortion of correlations on high-frequency financial data. We demonstrate that the asynchrony of trades as well as the decimalization of stock prices has a large impact on the decline of the…

Statistical Finance · Quantitative Finance 2010-10-01 Michael C. Münnix , Rudi Schäfer , Thomas Guhr

We prove large deviation principles (LDP) for the invariant measures of the multiclass totally asymmetric simple exclusion process (TASEP) and the multiclass Hammersely-Aldous-Diaconis (HAD) process on a torus. The proof is based on a…

Probability · Mathematics 2008-01-29 Davide Gabrielli

Maximum entropy estimation is of broad interest for inferring properties of systems across many different disciplines. In this work, we significantly extend a technique we previously introduced for estimating the maximum entropy of a set of…

Data Analysis, Statistics and Probability · Physics 2016-01-05 Elliot A. Martin , Jaroslav Hlinka , Alexander Meinke , Filip Děchtěrenko , Jörn Davidsen

Multi-task learning (MTL) has been successfully used in many real-world applications, which aims to simultaneously solve multiple tasks with a single model. The general idea of multi-task learning is designing kinds of global parameter…

Machine Learning · Computer Science 2023-01-24 Xuewen Tao , Mingming Ha , Xiaobo Guo , Qiongxu Ma , Hongwei Cheng , Wenfang Lin
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