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The problem of motif detection can be formulated as the construction of a discriminant function to separate sequences of a specific pattern from background. In computational biology, motif detection is used to predict DNA binding sites of a…

Genomics · Quantitative Biology 2010-12-10 Qing Zhou

One of the methods used in image recognition is the Deep Convolutional Neural Network (DCNN). DCNN is a model in which the expressive power of features is greatly improved by deepening the hidden layer of CNN. The architecture of CNNs is…

Computer Vision and Pattern Recognition · Computer Science 2020-07-10 Genta Kobayashi , Hayaru Shouno

Recent advances in learning Deep Neural Network (DNN) architectures have received a great deal of attention due to their ability to outperform state-of-the-art classifiers across a wide range of applications, with little or no feature…

Cryptography and Security · Computer Science 2018-04-03 Se Eun Oh , Saikrishna Sunkam , Nicholas Hopper

Deep neural networks have been developed drawing inspiration from the brain visual pathway, implementing an end-to-end approach: from image data to video object classes. However building an fMRI decoder with the typical structure of…

Machine Learning · Statistics 2017-01-10 Michele Svanera , Sergio Benini , Gal Raz , Talma Hendler , Rainer Goebel , Giancarlo Valente

Models based on deep convolutional neural networks (CNN) have significantly improved the performance of semantic segmentation. However, learning these models requires a large amount of training images with pixel-level labels, which are very…

Computer Vision and Pattern Recognition · Computer Science 2018-02-05 Linwei Ye , Zhi Liu , Yang Wang

In this work, we introduce a Denser Feature Network (DenserNet) for visual localization. Our work provides three principal contributions. First, we develop a convolutional neural network (CNN) architecture which aggregates feature maps at…

Computer Vision and Pattern Recognition · Computer Science 2021-03-15 Dongfang Liu , Yiming Cui , Liqi Yan , Christos Mousas , Baijian Yang , Yingjie Chen

Time series motifs play an important role in the time series analysis. The motif-based time series clustering is used for the discovery of higher-order patterns or structures in time series data. Inspired by the convolutional neural network…

Machine Learning · Computer Science 2020-01-22 Yadong Zhang , Xin Chen

Protein-ligand scoring is an important step in a structure-based drug design pipeline. Selecting a correct binding pose and predicting the binding affinity of a protein-ligand complex enables effective virtual screening. Machine learning…

Machine Learning · Statistics 2020-10-19 Joshua Hochuli , Alec Helbling , Tamar Skaist , Matthew Ragoza , David Ryan Koes

This paper presents a novel framework for demystification of convolutional deep learning models for time-series analysis. This is a step towards making informed/explainable decisions in the domain of time-series, powered by deep learning.…

Machine Learning · Computer Science 2020-05-06 Shoaib Ahmed Siddiqui , Dominik Mercier , Mohsin Munir , Andreas Dengel , Sheraz Ahmed

Standard deep learning models such as convolutional neural networks (CNNs) lack the ability of generalizing to domains which have not been seen during training. This problem is mainly due to the common but often wrong assumption of such…

Computer Vision and Pattern Recognition · Computer Science 2024-03-19 Mehrdad Noori , Milad Cheraghalikhani , Ali Bahri , Gustavo A. Vargas Hakim , David Osowiechi , Ismail Ben Ayed , Christian Desrosiers

Recently, convolutional neural networks (CNNs)-based facial landmark detection methods have achieved great success. However, most of existing CNN-based facial landmark detection methods have not attempted to activate multiple correlated…

Computer Vision and Pattern Recognition · Computer Science 2020-11-17 Jun Wan , Zhihui Lai , Linlin Shen , Jie Zhou , Can Gao , Gang Xiao , Xianxu Hou

Nowadays, we mainly use various convolution neural network (CNN) structures to extract features from radio data or spectrogram in AMR. Based on expert experience and spectrograms, they not only increase the difficulty of preprocessing, but…

Signal Processing · Electrical Eng. & Systems 2019-12-10 Miao Du , Qin Yu , Shaomin Fei , Chen Wang , Xiaofeng Gong , Ruisen Luo

Optical transmission spectroscopy is one method to understand brain tissue structural properties from brain tissue biopsy samples, yet manual interpretation is resource intensive and prone to inter observer variability. Deep convolutional…

Medical Physics · Physics 2025-05-20 Mohnish Sao , Mousa Alrubayan , Prabhakar Pradhan

In recent years, convolutional neural networks (CNNs) have been applied successfully in many fields. However, such deep neural models are still regarded as black box in most tasks. One of the fundamental issues underlying this problem is…

Computer Vision and Pattern Recognition · Computer Science 2021-11-04 Dawei Dai , Yutang Li , Huanan Bao , Sy Xia , Guoyin Wang , Xiaoli Ma

We propose DeepMiner, a framework to discover interpretable representations in deep neural networks and to build explanations for medical predictions. By probing convolutional neural networks (CNNs) trained to classify cancer in mammograms,…

Computer Vision and Pattern Recognition · Computer Science 2021-11-02 Jimmy Wu , Bolei Zhou , Diondra Peck , Scott Hsieh , Vandana Dialani , Lester Mackey , Genevieve Patterson

Deep neural networks ( DNNs ) are becoming a key enabling technology for many application domains. However, on-device inference on battery-powered, resource-constrained embedding systems is often infeasible due to prohibitively long…

Machine Learning · Computer Science 2019-11-13 Vicent Sanz Marco , Ben Taylor , Zheng Wang , Yehia Elkhatib

Facial expressions are one of the most powerful ways for depicting specific patterns in human behavior and describing human emotional state. Despite the impressive advances of affective computing over the last decade, automatic video-based…

Computer Vision and Pattern Recognition · Computer Science 2021-01-18 Thomas Teixeira , Eric Granger , Alessandro Lameiras Koerich

A central challenge in neuroscience is to understand neural computations and circuit mechanisms that underlie the encoding of ethologically relevant, natural stimuli. In multilayered neural circuits, nonlinear processes such as synaptic…

Neurons and Cognition · Quantitative Biology 2017-02-09 Lane T. McIntosh , Niru Maheswaranathan , Aran Nayebi , Surya Ganguli , Stephen A. Baccus

A wide variety of orthographic coding schemes and models of visual word identification have been developed to account for masked priming data that provide a measure of orthographic similarity between letter strings. These models tend to…

Computer Vision and Pattern Recognition · Computer Science 2023-03-15 Dong Yin , Valerio Biscione , Jeffrey Bowers

The graph structure is a commonly used data storage mode, and it turns out that the low-dimensional embedded representation of nodes in the graph is extremely useful in various typical tasks, such as node classification, link prediction ,…

Social and Information Networks · Computer Science 2020-08-03 Xing Li , Wei Wei , Xiangnan Feng , Xue Liu , Zhiming Zheng
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