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System identification is of special interest in science and engineering. This article is concerned with a system identification problem arising in stochastic dynamic systems, where the aim is to estimate the parameters of a system along…

Methodology · Statistics 2022-01-27 Christos Merkatas , Simo Särkkä

Dengue is a notifiable communicable disease in Sri Lanka since 1996. Dengue fever spread rapidly among people living in most of the districts of Sri Lanka. The present notification system of dengue communicable diseases which is enforced by…

Computers and Society · Computer Science 2014-05-19 Rukshan Alexander , Miroshan Alexander

The global population at risk of mosquito-borne diseases such as dengue, yellow fever, chikungunya and Zika is expanding. Infectious disease models commonly incorporate environmental measures like temperature and precipitation. Given…

Computers and Society · Computer Science 2019-04-04 Nabeel Abdur Rehman , Umar Saif , Rumi Chunara

Conditional Density Estimation (CDE) models deal with estimating conditional distributions. The conditions imposed on the distribution are the inputs of the model. CDE is a challenging task as there is a fundamental trade-off between model…

Machine Learning · Statistics 2018-10-31 Vincent Dutordoir , Hugh Salimbeni , Marc Deisenroth , James Hensman

This paper aims to extend the Besag model, a widely used Bayesian spatial model in disease mapping, to a non-stationary spatial model for irregular lattice-type data. The goal is to improve the model's ability to capture complex spatial…

Methodology · Statistics 2023-07-03 Esmail Abdul Fattah , Elias Krainski , Janet van Niekerk , Håvard Rue

For many infectious disease outbreaks, the at-risk population changes their behavior in response to the outbreak severity, causing the transmission dynamics to change in real-time. Behavioral change is often ignored in epidemic modeling…

Methodology · Statistics 2023-10-25 Caitlin Ward , Rob Deardon , Alexandra M. Schmidt

Background: Following the outbreak of the coronavirus epidemic in early 2020, municipalities, regional governments and policymakers worldwide had to plan their Non-Pharmaceutical Interventions (NPIs) amidst a scenario of great uncertainty.…

Exploiting the large amount of available data for addressing relevant social problems has been one of the key challenges in data mining. Such efforts have been recently named "data science for social good" and attracted the attention of…

Social and Information Networks · Computer Science 2015-10-21 Roberto C. S. N. P. Souza , Denise E. F de Brito , Renato M. Assunção , Wagner Meira

Gaussian process are a widely-used statistical tool for conducting non-parametric inference in applied sciences, with many computational packages available to fit to data and predict future observations. We study the use of the Greta…

Computation · Statistics 2025-03-31 Eva Gunn , Nikhil Sengupta , Ben Swallow

Dengue is a vector-borne disease transmitted by the mosquito Aedes aegypti. It has been observed that its incidence is strongly influenced by temperature and other abiotic factors like rainfall and humidity. In this work we compare the…

Populations and Evolution · Quantitative Biology 2016-05-23 Emilene Pliego Pliego , Jorge Velazquez-Castro , Andres Fraguela-Collar

Controlling diseases such as dengue fever, chikungunya and zika fever by introduction of the intracellular parasitic bacterium Wolbachia in mosquito populations which are their vectors, is presently quite a promising tool to reduce their…

Optimization and Control · Mathematics 2019-03-05 Pierre-Alexandre Bliman

A variety of models have been developed to forecast dengue cases to date. However, it remains a challenge to predict major dengue outbreaks that need timely public warnings the most. In this paper, we introduce CrossLag, an environmentally…

Machine Learning · Computer Science 2025-10-07 Ashwin Prabu , Nhat Thanh Tran , Guofa Zhou , Jack Xin

Aedes aegypti is known as the responsible vector transmitting dengue flavivirus. Unavailability of medication to cure the transmission of the virus in the human blood becomes a global health issue in recent decades. World epidemiologists…

Populations and Evolution · Quantitative Biology 2017-12-04 Karunia Putra Wijaya , Thomas Goetz , Edy Soewono

We introduce a Gaussian process-based model for handling of non-stationarity. The warping is achieved non-parametrically, through imposing a prior on the relative change of distance between subsequent observation inputs. The model allows…

Machine Learning · Statistics 2019-12-06 David Tolpin

Seasonal influenza epidemics cause consistent, considerable, widespread loss annually in terms of economic burden, morbidity, and mortality. With access to accurate and reliable forecasts of a current or upcoming influenza epidemic's…

Populations and Evolution · Quantitative Biology 2016-02-17 Logan C. Brooks , David C. Farrow , Sangwon Hyun , Ryan J. Tibshirani , Roni Rosenfeld

Time series forecasting is a challenging task due to the existence of complex and dynamic temporal dependencies. This can lead to incorrect predictions by even the best forecasting models. Using more training data is one way to improve the…

Machine Learning · Computer Science 2023-12-25 Sepideh Koohfar , Laura Dietz

This paper presents a multitask learning approach based on long-short-term memory (LSTM) networks for the joint prediction of arboviral outbreaks and case counts of dengue, chikungunya, and Zika in Recife, Brazil. Leveraging historical…

Machine Learning · Computer Science 2025-05-08 Lucas R. C. Farias , Talita P. Silva , Pedro H. M. Araujo

Effective intervention strategies for epidemics rely on the identification of their origin and on the robustness of the predictions made by network disease models. We introduce a Bayesian uncertainty quantification framework to infer model…

Populations and Evolution · Quantitative Biology 2020-04-02 Karen Larson , Clark Bowman , Zhizhong Chen , Panagiotis Hadjidoukas , Costas Papadimitriou , Petros Koumoutsakos , Anastasios Matzavinos

Consensus is a popular technique for distributed state estimation. This formulation allows networks of connected agents or sensors to exchange information about the distribution of a set of targets with their immediate neighbors without the…

Systems and Control · Electrical Eng. & Systems 2025-06-03 Ishan Paranjape , Islam Hussein , Jeremy Murray-Krezan , Sean Phillips , Suman Chakravorty

Although dengue fever is an ancient disease that should have been eradicated since time ago, in Mexico as well as in other regions worldwide the cases of classic and hemorrhagic dengue continue to be reported presently. Since 2002 (and…

Populations and Evolution · Quantitative Biology 2016-01-28 Erick J. Lopez-Sanchez , Norma Y. Sanchez-Torres , Carlos Trenado , Juan M. Romero
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