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Expander decompositions of graphs have significantly advanced the understanding of many classical graph problems and led to numerous fundamental theoretical results. However, their adoption in practice has been hindered due to their…

Data Structures and Algorithms · Computer Science 2026-04-27 Kathrin Hanauer , Monika Henzinger , Robin Münk , Harald Räcke , Maximilian Vötsch

Previous studies have demonstrated the strong performance of Graph Neural Networks (GNNs) in node classification. However, most existing GNNs adopt a node-centric perspective and rely on global message passing, leading to high computational…

Machine Learning · Computer Science 2026-01-14 Qian Zeng , Xin Lin , Jingyi Gao , Yang Yu

Decompositions of networks are useful not only for structural exploration. They also have implications and use in analysis and computational solution of processes (such as the Ising model, percolation, SIR model) running on a given network.…

Disordered Systems and Neural Networks · Physics 2020-04-29 Konstantin Klemm

An overlap representation is an assignment of sets to the vertices of a graph in such a way that two vertices are adjacent if and only if the sets assigned to them overlap. The overlap number of a graph is the minimum number of elements…

Discrete Mathematics · Computer Science 2010-08-17 Bill Rosgen , Lorna Stewart

Most of major algorithms for phylogenetic tree reconstruction assume that sequences in the analyzed set either do not have any offspring, or that parent sequences can maximally mutate into just two descendants. The graph resulting from such…

Populations and Evolution · Quantitative Biology 2013-10-09 Piotr Plonski , Jan P. Radomski

Dimensionality Reduction (DR) scatterplot layouts have become a ubiquitous visualization tool for analyzing multidimensional datasets. Despite their popularity, such scatterplots suffer from occlusion, especially when informative glyphs are…

Computer Vision and Pattern Recognition · Computer Science 2023-10-12 Gladys M. Hilasaca , Wilson E. Marcílio-Jr , Danilo M. Eler , Rafael M. Martins , Fernando V. Paulovich

Cross-graph node classification, utilizing the abundant labeled nodes from one graph to help classify unlabeled nodes in another graph, can be viewed as a domain generalization problem of graph neural networks (GNNs) due to the structure…

Machine Learning · Computer Science 2025-02-26 Guanzi Chen , Jiying Zhang , Yang Li

Dynamics on networks are often characterized by the second smallest eigenvalue of the Laplacian matrix of the network, which is called the spectral gap. Examples include the threshold coupling strength for synchronization and the relaxation…

Disordered Systems and Neural Networks · Physics 2010-11-01 Takamitsu Watanabe , Naoki Masuda

A well-trained Convolutional Neural Network can easily be pruned without significant loss of performance. This is because of unnecessary overlap in the features captured by the network's filters. Innovations in network architecture such as…

Computer Vision and Pattern Recognition · Computer Science 2019-02-26 Aaditya Prakash , James Storer , Dinei Florencio , Cha Zhang

We present an algorithm that enumerates all the minimal triangulations of a graph in incremental polynomial time. Consequently, we get an algorithm for enumerating all the proper tree decompositions, in incremental polynomial time, where…

Data Structures and Algorithms · Computer Science 2023-07-28 Nofar Carmeli , Batya Kenig , Benny Kimelfeld , Markus Kröll

Spatial graphs are particular graphs for which the nodes are localized in space (e.g., public transport network, molecules, branching biological structures). In this work, we consider the problem of spatial graph reduction, that aims to…

Machine Learning · Statistics 2026-03-10 Anna Calissano , Etienne Lasalle

\emph{Over-fitting} and \emph{over-smoothing} are two main obstacles of developing deep Graph Convolutional Networks (GCNs) for node classification. In particular, over-fitting weakens the generalization ability on small dataset, while…

Machine Learning · Computer Science 2020-03-13 Yu Rong , Wenbing Huang , Tingyang Xu , Junzhou Huang

Lifelong SLAM considers long-term operation of a robot where already mapped locations are revisited many times in changing environments. As a result, traditional graph-based SLAM approaches eventually become extremely slow due to the…

Robotics · Computer Science 2021-10-05 Gerhard Kurz , Matthias Holoch , Peter Biber

Community structure is a typical property of many real-world networks, and has become a key to understand the dynamics of the networked systems. In these networks most nodes apparently lie in a community while there often exists a few nodes…

Social and Information Networks · Computer Science 2017-12-07 Zhan Weihua , Chen Huahui , Guan Jihong , Jin Guang

Network science provides effective tools to model and analyze complex systems. However, the increasing size of real-world networks becomes a major hurdle in order to understand their structure and topological features. Therefore, mapping…

Social and Information Networks · Computer Science 2020-08-11 Zakariya Ghalmane , Chantal Cherifi , Hocine Cherifi , Mohammed El Hassouni

In this paper, we re-evaluate the basic strategies for label correcting algorithms for the multiobjective shortest path (MOSP) problem, i.e., node and label selection. In contrast to common believe, we show that---when carefully…

Data Structures and Algorithms · Computer Science 2016-04-28 Fritz Bökler , Petra Mutzel

We present a novel algorithm for the minimum-depth elimination tree problem, which is equivalent to the optimal treedepth decomposition problem. Our algorithm makes use of two cheaply-computed lower bound functions to prune the search tree,…

Discrete Mathematics · Computer Science 2020-06-18 James Trimble

Comparative analyses of phylogenetic trees typically require identical taxon sets, however, in practice, trees often include distinct but overlapping taxa. Pruning non-shared leaves discards phylogenetic signal, whereas tree completion can…

Populations and Evolution · Quantitative Biology 2026-04-28 Aleksandr Koshkarov , Nadia Tahiri

We study the network dismantling problem, which consists in determining a minimal set of vertices whose removal leaves the network broken into connected components of sub-extensive size. For a large class of random graphs, this problem is…

Physics and Society · Physics 2016-11-16 Alfredo Braunstein , Luca Dall'Asta , Guilhem Semerjian , Lenka Zdeborová

In this research, we propose a deep learning based approach for speeding up the topology optimization methods. The problem we seek to solve is the layout problem. The main novelty of this work is to state the problem as an image…

Machine Learning · Computer Science 2017-09-28 Ivan Sosnovik , Ivan Oseledets